Pairwise Alignments

Query, 598 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  372 bits (954), Expect = e-107
 Identities = 224/595 (37%), Positives = 318/595 (53%), Gaps = 6/595 (1%)

Query: 1   MPVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSG 60
           MP      ++  F L +VL  E     P F + + +  +A    A  +AE+   P N   
Sbjct: 1   MPETLLSPRNLAFELYEVLDAEALTLRPRFAEHSRETFDAALTTARTIAEKYFAPHNRKA 60

Query: 61  DQQGCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSA 120
           D+   +  D  +  +P+  K A DA+ E G++      E GG  LP  +  A   +  +A
Sbjct: 61  DENEPRYVDGRAELIPE-VKPAVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAA 119

Query: 121 NLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTK 180
           N     YP LT GA   +   G+ EQK  +L  M++G + GTM LTEPH G+ L  +RT+
Sbjct: 120 NAGTTAYPFLTMGAANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTR 179

Query: 181 AVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKED 240
           A P GDGSY++ G KIFIS G+H +++NIVH+V+A++  AP G KGISLFIVPK+ V  +
Sbjct: 180 AEPAGDGSYRLKGNKIFISGGDHELSENIVHMVLAKLPDAPPGVKGISLFIVPKYHVNPN 239

Query: 241 GTLGERNGVTCGAIEHKMGIHGNATCVMNYDD---ATGYLLGAENKGLSAMFVMMNEARL 297
           G+ G RN V    + HKMG  G  +  +N+ D     GYL+G  ++GL+ MF MMNEAR+
Sbjct: 240 GSRGPRNDVLLAGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQPHQGLACMFQMMNEARI 299

Query: 298 GVGLQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYN 357
           GVG+  + +G   Y  ++EYAR R QGR L   K P   A PII H D++R L+  KAY 
Sbjct: 300 GVGMGAVMLGYAGYLYSLEYARQRPQGR-LPDNKDPHSPAVPIIEHTDVKRMLLAQKAYV 358

Query: 358 EAGRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFG 417
           E      L+ A   D  H A DE  R+ A DLL L+TPI+K   +        +A Q+ G
Sbjct: 359 EGAFDLGLYAARLFDDTHTAPDENARKPAQDLLDLLTPIVKSWPSAFCLKANELAIQILG 418

Query: 418 GHGYIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEE 477
           GHGY  E+ + QY RD R+  I+EG  GIQ+LDL+GRKL  + G  +  L + I   CE 
Sbjct: 419 GHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLGRKLAQHNGAGLKQLIRLIAATCER 478

Query: 478 NRADEKLSLYTKGLKKGLNDLQAATMWFMQN-AMAKPDNAGAGSTDYMHLFGIVVLGYMQ 536
                 L    + L++  N LQ  T+  + + A  K   A A S  Y+  FG  V+G+  
Sbjct: 479 ASHHPNLDPLRQPLEQLANRLQGVTLALLGDLAQGKVAGALANSALYLKAFGHCVIGWRW 538

Query: 537 ALMAKAASEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMM 591
              A  A   +  G+ +D DF   KL  A++++   +P      A +E   DT +
Sbjct: 539 LEQAVHAELGMLKGTAADRDFYLGKLQAARYFLTWEVPGCHNELALLEAHDDTCL 593