Pairwise Alignments

Query, 598 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  495 bits (1274), Expect = e-144
 Identities = 268/595 (45%), Positives = 362/595 (60%), Gaps = 8/595 (1%)

Query: 4   YKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSGDQQ 63
           Y+AP++D  F+L+++  L  +    G E    D ++ I  EAA+   + + PLN + D+Q
Sbjct: 3   YQAPLRDMRFVLHELFDLSGHCQQLGIE-LDRDTLDGILEEAARFTGQIIAPLNRNSDEQ 61

Query: 64  GCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSANLS 123
           GC+    G V+ PDG + AY  Y E GW  +  P  +GGQGLP    A+  E + +A+LS
Sbjct: 62  GCQWVG-GEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASLS 120

Query: 124 LMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTKAVP 183
             +Y GLT+GA+ A+  HG++  K+ YL +MV G W+GTM LTEP  GTDL LLRT+A P
Sbjct: 121 FRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQP 180

Query: 184 QGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKEDGTL 243
           + DGSY+I+G KIFIS GE  +TDNIVHLV+AR+  AP G +GISLF+VPK L       
Sbjct: 181 EADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG----- 235

Query: 244 GERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVGLQG 303
           GERN + CGA+EHKMGI G +TCVMN+D A G+L+G  N+GL+ MF MMN+AR  VGLQG
Sbjct: 236 GERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGLQG 295

Query: 304 LSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAGRAF 363
           L + E A+Q  + YAR+R+Q RSL+G    +K ADPIIVHPD+RR L+T K   E  R  
Sbjct: 296 LGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCRML 355

Query: 364 LLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHGYIE 423
            ++TA Q D+ H A     RQAA     L+ PI+K   TD G + A +  QV+GGHGYI 
Sbjct: 356 GIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYIR 415

Query: 424 EHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRADEK 483
           E GM Q +RD+RIT +YEG NGIQALDL+ RK+  +GG  +  L  E+        A   
Sbjct: 416 EWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANALGG 475

Query: 484 LSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMAKAA 543
           L     G+ + L + +A +   ++     P  +GA S D++     V+L  M    A  A
Sbjct: 476 LQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAVRA 535

Query: 544 SEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF 598
              LA GS ++  F + KL  A FY  RI+P     +  +  GAD +M L A  F
Sbjct: 536 QATLATGS-AETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDF 589