Pairwise Alignments

Query, 253 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  105 bits (261), Expect = 1e-27
 Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 30  FPPFNFTDQEGRLAGFHVDLVREICAQLKVESKCQVQALPFDELEAALEMGEGEAVISGL 89
           +PPF F   +G +AGF  D+   +C ++K  +KC      FD L  AL++ + +A++S +
Sbjct: 34  YPPFAFKQPDGSIAGFDYDIGNALCEEMK--TKCTWVEQEFDGLIPALKVRKIDAILSSM 91

Query: 90  ATTADLRKSFTFSRPYLLLPARLAVNKAGKFTGSGADALSGKKVGVVGNSRHEQMLKAFF 149
           + T D +KS  F++ Y L PARL V K G       D L GKK+GV   S H++  K   
Sbjct: 92  SITDDRKKSVDFTKRYYLTPARL-VMKDGTTVSDSLDELKGKKIGVQRGSIHDRFAKEVL 150

Query: 150 --PKARVEGFDGYEPMYEALKTGKVDAIFADGLRLPFWVSGGASESCCALFGGPYMSDRF 207
               A V  +     +Y  +  G++D   AD   L        +    A  G  +   ++
Sbjct: 151 GAKGATVVPYGTQNEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPAFTDAKY 210

Query: 208 LGEGLSIMAVDPDNILVPAFDQALAALSRNGRLEEIYRRYFPYGLY 253
            G+G+ I     D   V   + A+ A+  NG+ +EI  +YF + +Y
Sbjct: 211 FGDGIGIAVRKGDKANVDRINAAIDAIRANGKYKEIESKYFNFDIY 256