Pairwise Alignments

Query, 253 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

 Score = 90.1 bits (222), Expect = 4e-23
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 12/240 (5%)

Query: 17  SSVPRIRFLMSVDFPPFNFTDQEGRLAGFHVDLVREICAQLKVESKCQVQALPFDELEAA 76
           +S   +RF     +PPFN+ D + +L GF VD+   +C Q+KVE  C + A  ++ +  A
Sbjct: 19  ASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE--CTLVAQDWEGIIPA 76

Query: 77  LEMGEGEAVISGLATTADLRKSFTFSRPYLLLPARLAVNKAGKFTGSGADALSGKKVGVV 136
           L   + +A+++ +  T + RK   F+  Y   P  +AV K  K   +  D + G  VG  
Sbjct: 77  LMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQTDFV-GYTVGAQ 135

Query: 137 GNSRHEQMLKAFFPKARVEGFDGYEPMYEA---LKTGKVDAIFADGLRLPFWVSGGASES 193
            +S      +  + KA  +    Y  M EA   L  G++D + AD   L  W++    + 
Sbjct: 136 SSSTQAIYAEDVYGKAGAD-VKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGD- 193

Query: 194 CCALFGGPYMSDRFLGEGLSIMAVDPDNILVPAFDQALAALSRNGRLEEIYRRYFPYGLY 253
           CC + G   ++D      +++     D  L    + AL  +  NG  ++I  +YF + +Y
Sbjct: 194 CCKILGD--VADTKADAAIAVR--KDDEALRQRLNTALQQIVANGTYQKIASKYFAFDIY 249