Pairwise Alignments

Query, 253 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score = 80.1 bits (196), Expect = 4e-20
 Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 8/232 (3%)

Query: 21  RIRFLMSVDFPPFNFTDQEGRLAGFHVDLVREICAQLKVESKCQVQALPFDELEAALEMG 80
           ++R  +   +PPFN  D  G + GF  D+   +CA++KVE  C V    +D +  AL   
Sbjct: 26  KLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKVE--CSVVTSDWDGIIPALNAK 83

Query: 81  EGEAVISGLATTADLRKSFTFSRPYLLLPARLAVNKAGKFTGSGADALSGKKVGVVGNSR 140
           + + ++S L+ T + +++  F+ PY     +    K   F  +  ++L GK +G    + 
Sbjct: 84  KFDFLVSSLSITDERKQAVDFTNPYYSNKLQFIAPKNVDFK-TDKESLKGKVIGTQRATL 142

Query: 141 HEQMLKAFFPKARVEGFDGYEPMYEALKTGKVDAIFADGLRLPFWVSGGASESCCALFGG 200
               L+  +P   ++ +D  E  Y  L +G++D I AD      W+      S     G 
Sbjct: 143 AGTYLEDNYPDVEIKLYDTQENAYLDLVSGRIDGILADKYVQYEWLK-SKDGSNFEFKGE 201

Query: 201 PYMSDRFLGEGLSIMAVDPDNILVPAFDQALAALSRNGRLEEIYRRYFPYGL 252
           P M    +G    I     D  L    ++ALA +  +G  ++I  +YFP+ +
Sbjct: 202 PVMDSDKIG----IAVRKGDTKLRDDLNKALAEIKADGTYKKINDKYFPFSI 249