Pairwise Alignments

Query, 253 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 243 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score =  107 bits (267), Expect = 2e-28
 Identities = 70/239 (29%), Positives = 119/239 (49%), Gaps = 20/239 (8%)

Query: 17  SSVPRIRFLMSVDFPPFNFTDQEGRLAGFHVDLVREICAQLKVESKCQVQALPFDELEAA 76
           S+  +I F +S  +PPF   D   ++ GF +DL + +C Q++ +  C      FD L  +
Sbjct: 18  SAADKINFGVSATYPPFESLDASNQIVGFDIDLAKALCKQMQAD--CTFTNHAFDSLIPS 75

Query: 77  LEMGEGEAVISGLATTADLRKSFTFSRPYLLLPARLAVNKAGKFTGSGADALSGKKVGVV 136
           L+  + +AVISG+  T +  K   F+ PY    A + + K G +T    D L GK++G+ 
Sbjct: 76  LKFKKYDAVISGMDITPERSKQVAFTDPYYANSA-VVIAKKGAYTSF--DQLKGKRIGME 132

Query: 137 GNSRHEQMLKAFFPKARVEGFDGYEPMYEALKTGKVDAIFADGLRLPFWVS-----GGAS 191
             + H++ L+   P+ +   +D Y+     LK G++D +F D   +  W+      G A+
Sbjct: 133 NGTTHQKYLQDKHPEVKTVAYDSYQNAIIDLKNGRIDGVFGDTAVVNEWLKTNPQLGTAT 192

Query: 192 ESCCALFGGPYMSDRFLGEGLSIMAVDPDN-ILVPAFDQALAALSRNGRLEEIYRRYFP 249
           E             ++ G GL I AV PDN  L+   + AL A+  +G  ++I  ++FP
Sbjct: 193 EK--------VTDPQYFGTGLGI-AVRPDNKALLEKLNGALKAIKADGTYQKISEQWFP 242