Pairwise Alignments

Query, 181 a.a., putative RNA polymerase sigma-70 factor from Agrobacterium fabrum C58

Subject, 204 a.a., RNA polymerase sigma factor RpoE from Rhodanobacter sp000427505 FW510-R12

 Score = 72.8 bits (177), Expect = 4e-18
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 10/182 (5%)

Query: 6   DDLDRALAA-CARGDRNALRVIFEREAGRLIAVAERIVKRRELAEEVVQESFVRIWTHAP 64
           ++LDRAL     +GDR A  ++  +   ++I +  R V+     E++ QESF+R W    
Sbjct: 11  NELDRALVERVQQGDRRAFDLLVRKYQHKVIGLVSRYVRTHAECEDIAQESFIRAWRAIG 70

Query: 65  QYRADHGSARGWIYAIVRNRALNLL-----RDGSRELTVQDVETLRDSEQADEVVAAWQK 119
            +R D  +   W+Y I  N A N L     R  S ++   + E +  +E+  +     ++
Sbjct: 71  SFRGD-SAFYTWLYKIAVNTAKNHLVAMGRRPPSGDIDADEAEFMAGAERMHDSATPERE 129

Query: 120 LDR---NSRLYECLGALDETKRQGILMAYVAGYSHGEIAGRLRVPLGTTKSWIRRGLSAL 176
           L R      ++  + +L E  R  I +  V G S+ EIA  +  P+GT +S I R   A+
Sbjct: 130 LMRQEIEQSVFSTVQSLPEELRTAITLREVDGLSYDEIAEAMGCPIGTVRSRIFRAREAI 189

Query: 177 RE 178
            E
Sbjct: 190 DE 191