Pairwise Alignments

Query, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

Subject, 583 a.a., long-chain-fatty-acid--CoA ligase FadD from Escherichia coli ECRC62

 Score =  623 bits (1606), Expect = 0.0
 Identities = 317/563 (56%), Positives = 407/563 (72%), Gaps = 8/563 (1%)

Query: 8   HPENVSVAKRWLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYREL 67
           H     + K WL  YP  VP+EI      SL+D+ E+S  ++AD+ AF +MG+ +T+R+L
Sbjct: 17  HFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKL 76

Query: 68  DADTRAVAAWLQSR-GLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELE 126
           +  +RA AA+LQ   GL+KGDRVA+MMPN+LQ PVA++GILRAGM+VVNVNPLYTPRELE
Sbjct: 77  EERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELE 136

Query: 127 HQLKDSGAKALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGL-KGHIVNLVVRKVKKL 185
           HQL DSGA A+ ++ NFAH  ++ V KTAV+HV++  MGD L   KG +VN VV+ +K+L
Sbjct: 137 HQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRL 196

Query: 186 VPAHAIPGSISFKAMLKEGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHANLLAN 245
           VP + +P +ISF++ L  G  +      L  +D+AFLQYTGGTTGV+KGA+LTH N+LAN
Sbjct: 197 VPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLAN 256

Query: 246 KAQISLWLDAAFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIP 305
             Q++       +  K+       + ALPLYHIFALT+N L+ I LGG NLLI NPRDIP
Sbjct: 257 LEQVNATYGPLLHPGKEL-----VVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIP 311

Query: 306 GFVKELSHYQPHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVV 365
           G VKEL+ Y      G+ TLFNAL+NN+EF++LD SSL    GGGM VQ+ VAERWV + 
Sbjct: 312 GLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLT 371

Query: 366 GCPITEGYGLSETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICI 425
           G  + EGYGL+E +P+ +VN  D    SG+IGLP+ STE  + D+D N +P G+ GE+C+
Sbjct: 372 GQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCV 431

Query: 426 RGPQVMAGYWQRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPN 485
           +GPQVM GYWQRPD T + I  +G+  +GD+  MDE G+ +IVDRKKDMILVSGFNVYPN
Sbjct: 432 KGPQVMLGYWQRPDATDE-IIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPN 490

Query: 486 EVEEVAASHPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTNYKRPK 545
           E+E+V   HPGV E AA+GVP   SGE VK+FVVKKD SLTE  L  FC + LT YK PK
Sbjct: 491 EIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPK 550

Query: 546 IIEFRTDLPKSNVGKILRRELRN 568
           ++EFR +LPKSNVGKILRRELR+
Sbjct: 551 LVEFRDELPKSNVGKILRRELRD 573