Pairwise Alignments

Query, 273 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 300 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  128 bits (322), Expect = 1e-34
 Identities = 70/266 (26%), Positives = 136/266 (51%), Gaps = 4/266 (1%)

Query: 11  LVLALGAFVMLLPFYWMALTSIRSPAEIFD-VSLWPIPQKFDAADNYARAAGQVPMARFM 69
           ++LA+G  +ML P  WM   S +   EIF  +SLWP    +D   N  +   +     +M
Sbjct: 35  ILLAVG-ILMLYPLAWMFSASFKPNHEIFTTLSLWPTHATWDGFINGWKTGTEYNFGHYM 93

Query: 70  LNGVIVCVGILVVQILTSVPAAYALAKLRFPGRKLLLGLVIAALCVPIQALALPLFVGLA 129
           +N     +  + + +++S   AY  A+   P +      +IA + +P   L +P ++   
Sbjct: 94  INTFKYVIPKVALTVISSTIVAYGFARFEIPWKNFWFATLIATMLLPSTVLLIPQYIMFR 153

Query: 130 KTQLLNTYFAMMMP--FFLSVFAIFLFNQSFRSYPDEIIEAARMDGFSEMEICWGLVLRG 187
           +  +LN+Y  + +P  F    F +F+  Q  R  P ++ EAA++DG +  ++ W +V+  
Sbjct: 154 EMGMLNSYLPLYVPVAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSWQVLWYVVVPI 213

Query: 188 SLPSLAAFSIFSLVAHWNDLYWPMIVISDTNLAPPPLGMMLFADVESGANYGALMAGATL 247
             P++ + ++F  +   ND   P+I +   +  P  L + +  DV  GA +  ++A A++
Sbjct: 214 LKPAIISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMASI 273

Query: 248 ITAPMVLCFLLARRHFIAGITMTGVK 273
              P ++ F +A+R+F+ G+T +G+K
Sbjct: 274 SILPSIIIFFMAQRYFVQGVTSSGIK 299