Pairwise Alignments

Query, 308 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 293 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  125 bits (315), Expect = 9e-34
 Identities = 85/284 (29%), Positives = 146/284 (51%), Gaps = 8/284 (2%)

Query: 29  GLMFAAPAGLLLLAIYIVPMFVLAGFSVTDYRLGALSTRFIGLGNFVKAF-QDPVFLRAL 87
           GL +  P  + LL    +P       S T Y L +  T + GL N+ + F +D  F+++L
Sbjct: 8   GLGYLTPYIVGLLVFTAIPFLGSLYLSFTRYDLMSDPT-WAGLANYERLFTRDRTFMKSL 66

Query: 88  ANTALYAIIVIPFGVFLALGVALLVYNRKRSRTFWEVAYFLP-VTATLVAMATVWQFLLH 146
             T  Y  + +P  +  AL +A ++  + +   F+  A+++P +    +A+A +W+++  
Sbjct: 67  NVTLFYVFLTVPLKLAFALFIAAILNYKLQFINFFRTAFYVPSILGGSIAIAVLWRYIF- 125

Query: 147 PSLGPVNAAIKWLGFEPVAFLSNPVLLIPTMALMGIWQVLGFNMVLFLAGLTAISKDLHE 206
            S G  N A+  +G  PV +  +P   + T+ L+  WQ  G  MV+FLA L +I K L+E
Sbjct: 126 ASEGLANMALAAIGLSPVDWFGDPGNALFTITLLRCWQ-FGSAMVIFLAALQSIDKSLYE 184

Query: 207 AARLDGAKNPVDRFLTVTWPMLGPTTMFVVVTTSISAFKVFETVAVLTKGRSGSETLLFD 266
           AA +DGA   V  F  +T P+L P   F ++   + AF+ F    ++T+G     T L  
Sbjct: 185 AAAIDGA-GKVKTFFFITLPLLTPVIFFNLIMQMVQAFQEFNGPYIITQGGPLKSTYLLP 243

Query: 267 LYL--EGFEYSNTGYAAALTIIFLVIVLILSIGQTLHMDRKVHY 308
           LY+  E F+  N GYA+A+  +   I+ +L++       + V+Y
Sbjct: 244 LYIYDEAFKKFNMGYASAIAWVLFTIITVLTLVAFWSSKKWVYY 287