Pairwise Alignments

Query, 398 a.a., succinyl-diaminopimelate desuccinylase from Agrobacterium fabrum C58

Subject, 375 a.a., succinyl-diaminopimelate desuccinylase from Escherichia coli ECRC62

 Score =  270 bits (691), Expect = 4e-77
 Identities = 153/392 (39%), Positives = 225/392 (57%), Gaps = 24/392 (6%)

Query: 6   PVANLAA-LIRCPSVTPAEGGALSLLDTLLSPLGFAVERVMATEDGTPDVENLYARLGTE 64
           PV  L   LIR PS++P + G  +LL   L  +GF VER+        D +N +A  G +
Sbjct: 4   PVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERM-----DFADTQNFWAWRG-Q 57

Query: 65  GPHLMFAGHTDVVPVGDEAAWSHPPFSADIAGGEMYGRGAVDMKGGIACFVAAIARHIGK 124
           G  L FAGHTDVVP GD   W +PPF   I  G ++GRGA DMKG +A  V A  R + +
Sbjct: 58  GETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQ 117

Query: 125 HGKPQGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMIKIGR 184
           H    G ++FLIT DEE  + NGT K++E   ++ E  D C+VGEP++ + +GD++K GR
Sbjct: 118 HPNHTGRLAFLITSDEEASAHNGTVKVVEALMSRNERLDYCLVGEPSSIEVVGDVVKNGR 177

Query: 185 RGSLSGRITVQGVQGHAAYPHLADNPIRGLLQLTHALMHPAFDHGTDDFQPSNLEVTTVD 244
           RGSL+  +T+ GVQGH AYPHLADNP+       + L+   +D G + F  +++++  + 
Sbjct: 178 RGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQ 237

Query: 245 TGNAATNVIPARATAAFNIRFNDSWTAESLRAEIIRRLDAAANEGELRPDRAPVKYEIVW 304
            G  + NVIP      FN RF+   T E ++A+++  L           ++  ++Y + W
Sbjct: 238 AGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALL-----------EKHQLRYTVDW 286

Query: 305 --ADRPSHVFLTRNNALISSLSGAIETVTGKEPKLSTTGGTSDARFI-KDYCPVVEFGLV 361
             + +P   FLT    L+ ++  A+E     +P+L TTGGTSD RFI +    VVE G V
Sbjct: 287 WLSGQP---FLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPV 343

Query: 362 GQTMHMVDERVAVADLETLTRIYETFIERWFA 393
             T+H ++E V  ADL+ L R+Y+  +E+  A
Sbjct: 344 NATIHKINECVNAADLQLLARMYQRIMEQLVA 375