Pairwise Alignments

Query, 170 a.a., polypeptide deformylase from Agrobacterium fabrum C58

Subject, 172 a.a., Peptide deformylase (EC 3.5.1.88) from Variovorax sp. SCN45

 Score =  150 bits (380), Expect = 8e-42
 Identities = 79/170 (46%), Positives = 111/170 (65%), Gaps = 2/170 (1%)

Query: 1   MTIKPLIILPDPVLRQQSKLIEQVDAEVLRLADDMLETMYDAPGIGLAAIQIGVPRRMLV 60
           M  + ++  PD  L   +K ++ VDA +  L  DMLETMYDA GIGLAA Q+ V  R++V
Sbjct: 1   MAKRIILSYPDKRLHTVAKPVQGVDARIKALVADMLETMYDANGIGLAATQVDVHERLVV 60

Query: 61  IDVAREGEEKTPVVFINPEILKVSDDISTYEEGCLSIPDYYAEVERPASLTVQYVGRDGK 120
           IDV+ E  E  P+V INPEI   SD+    EEGCLS+P  Y  V R  S+ VQ +  +G+
Sbjct: 61  IDVSEERNE--PIVLINPEITWASDEKVLNEEGCLSVPGIYDGVMRSTSVKVQALDENGE 118

Query: 121 QQTVEADGLLATCLQHEIDHLNGVLFIDHISRLKRDMVIKKFTKAARAKI 170
            +++EADGLLA C+QHE+DHL G +F++++S LKR+ +  K  K  R ++
Sbjct: 119 SRSIEADGLLAVCIQHELDHLLGKVFVEYLSPLKRNRIKSKLLKQQREEL 168