Pairwise Alignments

Query, 170 a.a., polypeptide deformylase from Agrobacterium fabrum C58

Subject, 179 a.a., Peptide deformylase (EC 3.5.1.88) from Variovorax sp. SCN45

 Score = 73.9 bits (180), Expect = 1e-18
 Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 11/155 (7%)

Query: 1   MTIKPLIILPDPVLRQQSKLIEQVDAEVLRL-ADDMLETMYDAPGIGLAAIQIGVPRRML 59
           M I+ ++ + DP L + ++ +   D + L L   DM ETM+   G GLAA QIGV ++++
Sbjct: 1   MAIREILKMGDPRLLRIAQPVAAFDTDELHLLVRDMFETMHAVNGAGLAAPQIGVDQQLV 60

Query: 60  VI--DVAREGEEKTP----VVFINPEILKVSDDISTYEEGCLSIPDYYAEVERPASLTVQ 113
           +   DV        P     V +NP I  ++D+     EGCLS+P     V R A+  ++
Sbjct: 61  IFGTDVVNPRYPDAPPVPRTVLLNPVITPLNDEEEEGWEGCLSVPGLRGVVPRFAN--IR 118

Query: 114 YVGRDGKQQTVE--ADGLLATCLQHEIDHLNGVLF 146
           Y G D     ++  A G  A  +QHE+DHL G L+
Sbjct: 119 YTGFDPYGDPIDRVATGFHARVVQHEVDHLLGKLY 153