Pairwise Alignments

Query, 410 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 455 a.a., DNA recombination protein RmuC from Variovorax sp. SCN45

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 86/335 (25%), Positives = 157/335 (46%), Gaps = 24/335 (7%)

Query: 60  AGADSEISDLLKTQ----SELHGR-IAAMAETLGTRQTEMSQTLNQRLDGMSQRLGETL- 113
           A     ++D L TQ    SE + R ++ +  T+ ++  ++ QT   +LD M + + E L 
Sbjct: 104 ASLQKTLADTLSTQLQGLSESNARRLSEVRATMESQLVQLQQTNAAKLDEMRKTVDEKLQ 163

Query: 114 -TEQTRSTHENLSRLQERLAVIDAAQGNIQDLAKDVVGLQAILSNKQTRGAFGQARMETL 172
            T +TR   E+  ++ +RL  +    G +Q LA  V  LQ +L+N +TRG FG+ ++E L
Sbjct: 164 STLETR-LGESFKQVADRLEQVHKGLGEMQTLAVGVGSLQRVLTNVKTRGVFGEVQLEAL 222

Query: 173 IADALPAGAF--QLQPTLSNGYRPDCIIKMP----NNAPA-LVIDAKFPLEAWNAIKADE 225
           +   L    +  Q++    +G R D  I+ P      AP  L IDAKFP + +  +  D 
Sbjct: 223 LEQVLTPDQYAKQIETKPRSGQRVDFAIRFPGRGEEGAPVWLPIDAKFPRDDYERL-IDA 281

Query: 226 TPETKRAAVQQFRRDMEVHIR----DVAEKYLIRGETQDTAFIFVPSESIFADIHQHFEY 281
                 A  +   + +E  IR     +A+ YL    T D A +F+P ES++A++ +    
Sbjct: 282 HERADAAGAELAAKALEARIRTEAKSIADNYLAAPHTTDFAILFLPVESLYAEVLRRPGL 341

Query: 282 L--VQRAHRARVVIVSPSLLMLSVQVIQSVLKDQRMREQAHLIQGEVALLMDDVRRLDDR 339
           +  +QR H  RV +  P+ L+  +  +    +   + +QA  +   +  +  +  R  D 
Sbjct: 342 MDAIQRQH--RVTLAGPTTLLAMLNSLHMGFRTLALEQQASEVWKVLGAVKTEFERYGDW 399

Query: 340 TRKLQAHFGLAQKDVDMMLISSDKVLARGQKIEGL 374
             +++     A   +D     + ++    +K+E L
Sbjct: 400 VGRIKEQVAKASDTLDKADTRAKQMRLALRKVEAL 434