Pairwise Alignments

Query, 883 a.a., DNA mismatch repair protein, MutS family from Agrobacterium fabrum C58

Subject, 892 a.a., DNA mismatch repair protein MutS from Paraburkholderia sabiae LMG 24235

 Score =  555 bits (1429), Expect = e-162
 Identities = 355/901 (39%), Positives = 508/901 (56%), Gaps = 48/901 (5%)

Query: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP 60
           MM+QY+ IK  +PG+L+FYRMGDFYELFFDDA +A+R L +TLT+RG   G+ I M GVP
Sbjct: 17  MMQQYLRIKGEHPGTLVFYRMGDFYELFFDDAEKAARLLDLTLTRRGASGGNPIKMAGVP 76

Query: 61  VHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP 120
            HA + YL KL+  G  VA+CEQI DPA      SK  V+R VVR+VTPGTLT+  LLS 
Sbjct: 77  HHAVEQYLAKLVKLGESVAICEQIGDPAT-----SKGPVERKVVRVVTPGTLTDAALLSD 131

Query: 121 TESNYLMALA--RIRGSAEAQFALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVAD 178
               YL+A+     R        LAW+++++G  RLAE    ++ A + RI P E++VAD
Sbjct: 132 KSDTYLLAVCAGHNRRGLVTTVGLAWLNLASGALRLAEVAPDQVAAALERIRPAEILVAD 191

Query: 179 SLFHDEE----LRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFS-RVE 233
           +    +     +   F    RV    P   FD A    R+     V+ LDGFG  S    
Sbjct: 192 APSSGDSNAWSVPTGFGATTRV----PVWHFDIASGTQRLCDQLEVAGLDGFGAHSLSCA 247

Query: 234 MAAAAAAVAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLH 293
             AA A + Y   TQ  +   + + + E  +  + +DP+TR NLEL +TL G    +L  
Sbjct: 248 CGAAGALLLYAAATQGQQLRHVRSLKVEYESEYIGLDPSTRRNLELTETLRGTDSPTLCS 307

Query: 294 ALNRTVTGGGARLLAERLMSPLTDPERINARLDAVAYLID---DVSLCDGLRDALKHVAD 350
            L+   T  G+RLL   L  P  D     AR  A+  L+D   + SL D LR AL+ ++D
Sbjct: 308 LLDTCCTTMGSRLLRHWLHHPPRDAAFAQARQQAIGALLDAPPEASL-DALRGALRQISD 366

Query: 351 MPRALSRLALERGGPRDLGAIRQGLVSAEKIAVILDG-GLLPDELAKALRDLKALPGALE 409
           + R   RLAL    PRDL ++R   V+  ++   L       D LA+    L+  P    
Sbjct: 367 IERITGRLALLSARPRDLSSLRDTFVALPELRAQLTALTAAADSLARIDASLEP-PADCV 425

Query: 410 AMLGSMLADDLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLK 469
            +L   +A +   + RDGG +  G + +LDE+R + +   + +  L+ +    TGI +L+
Sbjct: 426 DLLKRAVAQEPAAMIRDGGVIARGYDADLDELRDISENCGQFLIDLETRERARTGIGNLR 485

Query: 470 IKHNNVLGYFIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAA 529
           +++N V G++IEVT G       TD+    +  RQT+  A R+ T EL   E +  +A  
Sbjct: 486 VEYNKVHGFYIEVTRGQ------TDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQE 539

Query: 530 EALTMELEAFERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTF 589
            AL  E   ++ ++++++      +  A ALA +D+ ++ A  A    +  P    +   
Sbjct: 540 RALAREKALYDALLQSLLPFIADCQRVASALAELDLLAAFAERARALDWVAPSFSPTGGI 599

Query: 590 SIKGGRHPVVEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNAL 649
            I+ GRHPVVE  + +     FIAN+C L+         + L+TGPNMGGKSTF+RQ AL
Sbjct: 600 DIEQGRHPVVEAQVEQ-----FIANDCALNPER-----KLLLITGPNMGGKSTFMRQTAL 649

Query: 650 IAILAQIGSFVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSL 709
           IA++A +GS+VPA  A  G +DR+F+R+GA+DDLA GRSTFMVEM E AAILN AT +SL
Sbjct: 650 IALMAYVGSYVPARRASFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSL 709

Query: 710 VILDEIGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRV 769
           V++DEIGRGT+TFDGL++AWA   HL   N C  LFATH+ ELT L  +    +N  +  
Sbjct: 710 VLMDEIGRGTSTFDGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPHAANVHLSA 769

Query: 770 KEWEGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLI 829
            E    ++FLH V  G A++SYG+QVA+LAG+P +V+  AR+ L  LE      PA QL 
Sbjct: 770 VEHGHGIVFLHAVNEGPANQSYGLQVAQLAGVPNAVIRAARKHLAYLEQQSAAQPAPQL- 828

Query: 830 DDLPLFQIAVRRE-ETRKAGPS------KVEEALKSFNPDEMTPREALDALYALKKELGK 882
            DL    +A+  + +   A P+       + E L+  +P+++ PR+ALD L+ L  EL K
Sbjct: 829 -DLFAAPVAMLEDADDEPAAPALDPATLALVERLREIDPNDLRPRDALDLLFEL-HELAK 886

Query: 883 A 883
           +
Sbjct: 887 S 887