Pairwise Alignments

Query, 883 a.a., DNA mismatch repair protein, MutS family from Agrobacterium fabrum C58

Subject, 868 a.a., DNA mismatch repair protein MutS from Magnetospirillum magneticum AMB-1

 Score =  876 bits (2264), Expect = 0.0
 Identities = 484/884 (54%), Positives = 603/884 (68%), Gaps = 20/884 (2%)

Query: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP 60
           MM QY+ IK  +P  LLFYRMGDFYELFFDDAV+AS AL I LTKRG+H G DI MCGVP
Sbjct: 1   MMAQYLAIKRAHPDCLLFYRMGDFYELFFDDAVKASAALDIALTKRGKHAGEDIAMCGVP 60

Query: 61  VHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP 120
           V A + YL KL+  G++VA+ EQ+EDPAEAKKRGSKSVV RDVVR++T GTLTE+ LL  
Sbjct: 61  VRAYEAYLAKLVRSGFKVAIGEQMEDPAEAKKRGSKSVVARDVVRVITAGTLTEDTLLDA 120

Query: 121 TESNYLMALARIRGSAEAQFALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVADSL 180
              NYL A+A  +G+      LAW+D+STG F +       L A + R+ P EL+V+D L
Sbjct: 121 RSHNYLAAVAEAQGT----LGLAWVDVSTGDFAMQAIAPKTLAAALARLSPGELLVSDRL 176

Query: 181 FHDEELRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFSRVEMAAAAAA 240
               +   V+     V  P P   FDS  +  R+   + V  LDGFG FSR E+AA  A 
Sbjct: 177 LGAADFFDVWADWKNVLSPLPTARFDSENSRRRLEALYGVGALDGFGAFSRAELAAGGAL 236

Query: 241 VAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLHALNRTVT 300
           V YVE TQ  + P L  P+R +  + + ID ATR NLEL +TLSG+R GSLL  ++RTVT
Sbjct: 237 VDYVELTQKGKLPRLSLPKRLAEGAVMEIDAATRRNLELAETLSGERRGSLLATIDRTVT 296

Query: 301 GGGARLLAERLMSPLTDPERINARLDAVAYLIDDVSLCDGLRDALKHVADMPRALSRLAL 360
           G GARLLA +L +PLTDP  I  RLD V + ++  S+   LR+ LK   D+ RALSRL+L
Sbjct: 297 GAGARLLAAQLAAPLTDPHAIEWRLDMVGFFVEHESVRAQLRETLKRCPDVERALSRLSL 356

Query: 361 ERGGPRDLGAIRQGLVSAEKIAVILDGGLL--PDELAKALRDLKALPGALEAMLGSMLAD 418
            RGGPRDL  +R  L     + +++    L  P  + +  R+L     AL   L   LA 
Sbjct: 357 GRGGPRDLANVRDALAEIPALRMLVTQSHLDTPPGINQCARELGE-HSALVDRLQRALAP 415

Query: 419 DLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLKIKHNNVLGY 478
           DLPL  RDGGF+ +G +  LDE++ L+ +S  ++  L+ +Y DETGI SLKI+HNN++G+
Sbjct: 416 DLPLNARDGGFIAQGYHEGLDELKGLKTESNGLMMRLEKRYQDETGIASLKIRHNNIIGH 475

Query: 479 FIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEA 538
            IEV +  AD +         +IHRQTMA A R+TTTEL +L  +I  AA  AL +E+E 
Sbjct: 476 HIEVPSKQADRL------GEGYIHRQTMANAARYTTTELIELAGKITGAADRALALEMEL 529

Query: 539 FERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKGGRHPV 598
              ++  V  +A  I   A ALA +D AS+L  +A+   + RP VD S  F I+G RHPV
Sbjct: 530 LADLIGEVTARAAEIALAAAALAGLDCASALGEMASSARWSRPRVDDSTAFDIRGARHPV 589

Query: 599 VEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQIGS 658
           VE AL    +GPF+AN+CDL+      +  +WL+TGPNM GKSTFLRQNA+IAILAQ+GS
Sbjct: 590 VEAALEAARSGPFVANDCDLA-----DSQRLWLVTGPNMAGKSTFLRQNAVIAILAQMGS 644

Query: 659 FVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRG 718
           FVPAE+ H+GVVDRLFSRVGA+DDLARGRSTFMVEMVETAAILNQA  R+LVILDEIGRG
Sbjct: 645 FVPAESVHMGVVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGPRALVILDEIGRG 704

Query: 719 TATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWEGDVIF 778
           TATFDGLSIAWA VEHLHEVNRCR LFATH+HELT L+ +L  LS   MRVKEW+GDV+F
Sbjct: 705 TATFDGLSIAWAVVEHLHEVNRCRALFATHYHELTRLTSRLAALSCHMMRVKEWQGDVVF 764

Query: 779 LHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDDLPLFQIA 838
           LHEVG GAADRSYGI VARLAGLP +VV RA EVL  LE +D+ +  ++L DDLPLF   
Sbjct: 765 LHEVGAGAADRSYGIHVARLAGLPPAVVGRAEEVLGILEKSDQASGMARLADDLPLFAAL 824

Query: 839 VRREETRKAGP--SKVEEALKSFNPDEMTPREALDALYALKKEL 880
            +      A P  S +EEALK+ NPD++T R+ALD +Y LK+ L
Sbjct: 825 AKPRPAATALPQASPLEEALKAVNPDDLTARQALDLVYELKRLL 868