Pairwise Alignments

Query, 883 a.a., DNA mismatch repair protein, MutS family from Agrobacterium fabrum C58

Subject, 864 a.a., DNA mismatch repair protein MutS from Kangiella aquimarina DSM 16071

 Score =  580 bits (1494), Expect = e-169
 Identities = 363/888 (40%), Positives = 522/888 (58%), Gaps = 51/888 (5%)

Query: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP 60
           MM QY ++K N+   LLFYRMGDFYELF+DDA  A+  L ITLTKRG   G  IPM GVP
Sbjct: 19  MMRQYWQLKQNHMDYLLFYRMGDFYELFYDDAKRAAELLDITLTKRGSSAGEPIPMAGVP 78

Query: 61  VHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP 120
            HA D YL +++  G  VA+CEQI DPA      SK  V R VVR+VTPGTL +E LL  
Sbjct: 79  FHAVDSYLARIVKLGESVAICEQIGDPAT-----SKGPVDRKVVRIVTPGTLYDENLLDA 133

Query: 121 TESNYLMALARIRGSAEAQFALAWIDISTGVFRLAE-TTLTRLLADIWRIDPRELIVADS 179
                L A  + R      + LA +D+++G F L+E        A+++RI P ELI+AD+
Sbjct: 134 LSDKLLAAAYKKRN----HYGLACLDMASGRFWLSEFDNKNAFQAELFRIKPAELILADN 189

Query: 180 LFHDEELRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFS-RVEMAAAA 238
               +EL      L      QP   FD      ++  +F V +L  FG     + + AA 
Sbjct: 190 ---QQELT---QGLNTAVKWQPDWAFDFEQNRDKLLNHFAVQSLASFGCDDYELAICAAG 243

Query: 239 AAVAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLHALNRT 298
           A + Y + TQ+   P +   ++   +  L +DPATR NLEL + + G    +L   +N T
Sbjct: 244 AVLDYAKATQLNNLPHIRLLQKLEHSDQLVLDPATRRNLELTENIQGGHSNTLFEVMNST 303

Query: 299 VTGGGARLLAERLMSPLTDPERINARLDAVAYLIDDVSLCDGLRDALKHVADMPRALSRL 358
            T  GARLL   L +PL +   +  RLD+V  LI D +    ++  L  VAD+ R ++R+
Sbjct: 304 QTVMGARLLKRCLHTPLRNHANVQKRLDSVENLIHDHAFIS-IQPILAEVADIERIVTRI 362

Query: 359 ALERGGPRDLGAIRQGLVSAEKIAVILDGGLLPDELAKALRDLKALPGALEAMLGSMLAD 418
           AL    PRDL  ++QGL  +  +   L+   L   L +A ++++ LP  ++ +L   L +
Sbjct: 363 ALASANPRDLKRLQQGLTQSSLLLEELNQ--LNISLDQA-QNIEPLPN-IQQLLERALVE 418

Query: 419 DLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLKIKHNNVLGY 478
             P++ RDGG + EG N ELDE+R+L D +   +  L+ +  +E+GI +LK+ +N V G+
Sbjct: 419 QPPMVIRDGGVIAEGYNTELDELRSLADDANEFMLALEQREKEESGINTLKVGYNKVHGF 478

Query: 479 FIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEA 538
           +IE++   +       +A  R+I RQT+  A RF T EL + E ++  +   AL +E   
Sbjct: 479 YIEISRAQSH------QAPVRYIRRQTLKNAERFITPELKEYEEKVLTSKTRALALEKRL 532

Query: 539 FERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKGGRHPV 598
           ++ +++ + +    I++ A A+A IDV +  A  AT   + RP +  +   +IK GRHPV
Sbjct: 533 YDELIQELQKHVAEIQSTASAIAEIDVLACFAERATNLGFNRPALSNNEGLTIKQGRHPV 592

Query: 599 VEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQIGS 658
           VE      S  PFI N  DL+  N  ++    ++TGPNMGGKST++RQ ALI +LA IGS
Sbjct: 593 VEF----HSKEPFIPN--DLTINNQERS---LIITGPNMGGKSTYMRQTALITLLAYIGS 643

Query: 659 FVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRG 718
           +VPA+AA IG +DR+F+R+GASDDLA GRSTFMVEM ETA ILN AT  SL++LDEIGRG
Sbjct: 644 YVPADAAEIGPIDRIFTRIGASDDLASGRSTFMVEMSETANILNNATSNSLILLDEIGRG 703

Query: 719 TATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSN----ATMRVKEWEG 774
           T+TFDGL++A A ++++HE  +   LFATH+ ELT  +E+   + N    AT      + 
Sbjct: 704 TSTFDGLALASATIQYIHEKLQSYTLFATHYFELTQQAEQWDAMVNLHFSATEHKDGGQD 763

Query: 775 DVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDDLPL 834
            +IF H++ PG A++SYGIQVA+LAGLP +V+++AR +L   E             +LP 
Sbjct: 764 KLIFSHQIQPGPANQSYGIQVAQLAGLPKTVIQQARLLLQHFEQHGTHE------TELP- 816

Query: 835 FQIAVRREETRKAGP--SKVEEALKSFNPDEMTPREALDALYALKKEL 880
            QI +   E+ ++ P    + E ++S N DEMTPREAL+ LY LK+ L
Sbjct: 817 -QIDLELIESTQSNPELEAMAELVQSANLDEMTPREALELLYKLKESL 863