Pairwise Alignments

Query, 520 a.a., chromosomal replication initiator protein DnaA from Agrobacterium fabrum C58

Subject, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

 Score =  245 bits (625), Expect = 3e-69
 Identities = 164/514 (31%), Positives = 263/514 (51%), Gaps = 51/514 (9%)

Query: 39  LFERFSARLKAQVGPEVYASWFARLKLHTVSKSVVRFTVPTTFLKSWINNRYMDLITSLV 98
           L+++    L+ ++  + + +W   L++      + R   P  F+  W+N +Y+  +  L+
Sbjct: 5   LWQQCVELLRDELPAQQFNTWIRPLQVEAEGDEL-RVYAPNRFVLDWVNEKYLGRLLELL 63

Query: 99  QSEDPDVLKVEILVRSASRPVRPAQTEERAQPVQEVGAAPRNKSFIPSQSATAPAA--QP 156
                 +     L+  + R   P     RA P   V AA            TAPAA  +P
Sbjct: 64  GENGSGIAPALSLLIGSRRSSAP-----RAAPNAPVSAAVAASLAQTQAHKTAPAAAVEP 118

Query: 157 MAAQAT---------------LRQGGSGPLFG------------------SPLDTRFTFD 183
           +A  A                + +  + P  G                  S L+  FTFD
Sbjct: 119 VAVAAAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFD 178

Query: 184 TFVEGSSNRVALAAAKTIAEAGAGAVRFNPLFIHAGVGLGKTHLLQAIANAAIDSPRNPR 243
           TFVEG SN++A AAA  +A+       +NPLF++ GVGLGKTHL+ A+ N  +    N +
Sbjct: 179 TFVEGKSNQLARAAAWQVADNPKHG--YNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAK 236

Query: 244 VVYLTAEYFMWRFATAIRDNDALTLKDTLRNIDLLVIDDMQFLQGK-MIQHEFCHLLNML 302
           VVYL +E F+     A++ N     K   R++D L+IDD+QF   K   Q EF H  N L
Sbjct: 237 VVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNAL 296

Query: 303 LDSAKQVVVAADRAPWELESLDPRVRSRLQGGMAIEIEGPDYDMRYEMLNRRMGSARQDD 362
           L+  +QV++ +DR P E+E L+ R++SR   G+ + +E P+ + R  +L ++   A+   
Sbjct: 297 LEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAK--- 353

Query: 363 PSFEISDEILTHVAKSVTASGRELEGAFNQLMFRRSFEP-NLSVDRVDELLSHLVGSGEA 421
              E+  +    +A+ + ++ RELEGA  +++    F   +++++ + E L  L+   + 
Sbjct: 354 --VELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQD- 410

Query: 422 KRVRIEDIQRIVARHYNVSRQELVSNRRTRVIVKPRQIAMYLAKMLTPRSFPEIGRRFGG 481
           K V +++IQR VA +Y +   +L+S RR+R + +PRQ+AM L+K LT  S PEIG  FGG
Sbjct: 411 KLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGG 470

Query: 482 RDHTTVLHAVRKIEDLISGDTKLGHEVELLKRLI 515
           RDHTTVLHA RKI +L   D  +  + + L R +
Sbjct: 471 RDHTTVLHACRKINELKESDADIREDYKNLLRTL 504