Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 271 a.a., Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  155 bits (393), Expect = 7e-43
 Identities = 109/299 (36%), Positives = 150/299 (50%), Gaps = 30/299 (10%)

Query: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60
           MPELPEVE  RR  A  + GA+V  L LG+P LR+P   +   L+ G+ + S+ RR KYL
Sbjct: 1   MPELPEVEVTRRSFADRIAGAQVHALSLGKP-LRWPLGCEPTALV-GRRVRSVARRGKYL 58

Query: 61  LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV 120
           L+ L++G+ ++ HLGMSGS +              F +     G HDH       G  R+
Sbjct: 59  LVHLDEGVLLL-HLGMSGSLQ--------------FAHNLPPRGVHDHFELLTSHGVLRL 103

Query: 121 CVIYNDPRRFG-FMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKSTL 179
               +DPRRFG  ++    +   +      LG EP              + +   +K  L
Sbjct: 104 ----HDPRRFGAVVYAPSLDDARVLKLLGGLGVEPLEVGFDPAGFHRALKLRRAAVKQVL 159

Query: 180 LDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIAA 239
           L   I+ G+GNIY  EAL+ + + P   A  L     KP+A  +     I  V+  A+A 
Sbjct: 160 LAGDIVVGVGNIYASEALFMSGIHPALRADRL----SKPRAARLHAA--IVSVLQRAVAL 213

Query: 240 GGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298
           GGS+LRD    +G  GYFQ    VY +EGQPCR   CG  V+ + Q  RSTF+C  CQK
Sbjct: 214 GGSTLRDFSSAEGQSGYFQLDAMVYGREGQPCRV--CGTPVKAMRQGQRSTFFCPVCQK 270