Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 269 a.a., Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  183 bits (464), Expect = 4e-51
 Identities = 116/300 (38%), Positives = 163/300 (54%), Gaps = 33/300 (11%)

Query: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60
           MPELPEVET RRG+ P + GA +   H+    LR+P   +   L +   ++S+ RRAKYL
Sbjct: 1   MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLSD-TPVLSVQRRAKYL 59

Query: 61  LIELEDGLTIVSHLGMSGSFRI--EAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEE 118
           L+EL DG  I+ HLGMSGS RI  EA   E                KHDHV   +  G+ 
Sbjct: 60  LLELPDGWIII-HLGMSGSLRILPEALPAE----------------KHDHVDLVMSNGK- 101

Query: 119 RVCVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKST 178
              + Y DPRRFG    +   +L+ +   A LGPEP  +  + +YL  +   K   +K  
Sbjct: 102 --ILRYTDPRRFGAW--LWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPW 157

Query: 179 LLDQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIA 238
           L+D K++ G+GNIY  E+L+ A + P R A +L T      A++      I+ V+  +I 
Sbjct: 158 LMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLARV------IKAVLLRSIE 211

Query: 239 AGGSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298
            GG++L+D +Q+DG  GYF     VY ++G+PCR   CG  +     A R+TFYC  CQK
Sbjct: 212 QGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPCRV--CGTPIVATKHAQRATFYCRHCQK 269