Pairwise Alignments

Query, 298 a.a., formamidopyrimidine-DNA glycosylase from Agrobacterium fabrum C58

Subject, 269 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Dickeya dadantii 3937

 Score =  187 bits (474), Expect = 3e-52
 Identities = 114/298 (38%), Positives = 159/298 (53%), Gaps = 29/298 (9%)

Query: 1   MPELPEVETVRRGLAPAMEGARVRKLHLGRPDLRFPFPADFAGLIEGKTIISLGRRAKYL 60
           MPELPEVET RRG++P + G  +    +    LR+P   +   L +   ++S+ RRAKYL
Sbjct: 1   MPELPEVETSRRGISPWLVGHTILYAEVRNARLRWPVSPEILSLSD-TPVLSVQRRAKYL 59

Query: 61  LIELEDGLTIVSHLGMSGSFRIEAEKGEGGEAPGAFHYARSKDGKHDHVVFHLDKGEERV 120
           LIEL  G  IV HLGMSGS R+  E  E                KHDHV   +D G+   
Sbjct: 60  LIELPTGWIIV-HLGMSGSLRVLPEYSE--------------PDKHDHVDLVMDSGK--- 101

Query: 121 CVIYNDPRRFGFMHLVERNKLDLYPAFAELGPEPTGNALSADYLASRFEGKSQPLKSTLL 180
            + Y DPRRFG     +          A LGPEP  +  S  YL ++  G+  P+K  ++
Sbjct: 102 VLRYTDPRRFGAWLWCDDPATS--SVLAHLGPEPLSDDFSGRYLFAQSRGRKTPIKLWIM 159

Query: 181 DQKIIAGLGNIYVCEALWRAHLSPLRAAGTLVTTRGKPKAQLIDLTEKIRDVIADAIAAG 240
           D K++ G+GNIY  E+L+ A + P R AG+L       + +   L   I+ V+  +I  G
Sbjct: 160 DNKLVVGVGNIYASESLFNAGVLPNRPAGSL------SEVEADQLVRSIKQVLQRSIEQG 213

Query: 241 GSSLRDHIQTDGTLGYFQHSFSVYDQEGQPCRTPGCGGTVERVVQAGRSTFYCAACQK 298
           G++LRD +Q+DG  GYF     VY + G+PC    CG  +E + Q  RSTF+C  CQ+
Sbjct: 214 GTTLRDFLQSDGKPGYFAQELQVYGRSGEPCH--HCGTPIESIKQGQRSTFFCKCCQR 269