Pairwise Alignments

Query, 293 a.a., ABC transporter, membrane spanning protein (sn-Glycerol-3-phosphate) from Agrobacterium fabrum C58

Subject, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 65/282 (23%), Positives = 130/282 (46%), Gaps = 14/282 (4%)

Query: 7   SSSYVPYLFLAPQLAVIFIFFYWPSVQAVQSSFYIE--DPFGFAASFVGFANYSDAIFNP 64
           S + + Y FLAP L +   F+ WP + +   SF     +P+ FA S     N+   + +P
Sbjct: 3   SRNRIAYAFLAPYLLIFATFWVWPIISSFMLSFQNTRINPWRFAPSM----NWGRLVSDP 58

Query: 65  EYLSIAKFTVVFTVLVTFFSLALGLLLAVKADA-VIRGSSTYKTLLISVYAIAPPVAGLI 123
            + +    T++  V+     +AL  ++AV  ++ +++    Y+    +   +       +
Sbjct: 59  AFYNALYNTLIILVIQVPVMIALATVMAVLLNSPLLKVRPLYRFAFFAPVVVGEVAYAAV 118

Query: 124 GMMLFDQHIGPFVKLAAVFGWDMKVGLNYFDTATAMIVVAV-WKQIPYNFIFFLSGLQGV 182
             ++F    G   KL    G       +  + A A++++AV W+   YN I  L+GLQ +
Sbjct: 119 FRLMFSADFGIINKLITSVGLSPISWFDNANAAMALVIIAVTWRWAGYNAIIILAGLQSI 178

Query: 183 SVSVREAAAIDCRSGFRRFWTVIMPLLAPTAFFLLIINI--TYALF-DTFGVIDVMVKDK 239
              V EAA +D  S  ++F+ + +PLL P   F +++++  T  LF + F + +   +  
Sbjct: 179 PGDVYEAATLDKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITN---RGG 235

Query: 240 AADNPITLVYKVFLDGFRGNDIGGSSAQSVILMLVVFVLTVI 281
                 TL   ++  GF   + G +SA +  +  +   ++++
Sbjct: 236 PGGGTETLGLFLYRQGFTSLNFGYASAIAYTMAALAIAISLL 277