Pairwise Alignments

Query, 327 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  114 bits (284), Expect = 4e-30
 Identities = 79/245 (32%), Positives = 119/245 (48%), Gaps = 14/245 (5%)

Query: 78  LLISGSTSRSESEPETRRERQALAAWLRRVVGLDTTVISICSGALLAGEAGLFDGRSCTT 137
           L++SG       E       +A +A  RRV        S+C G  +  EAGL +G+  TT
Sbjct: 68  LIVSGYLEFRLPEANLLELVKAASAQSRRVA-------SLCMGIFVLAEAGLLEGKRTTT 120

Query: 138 HSDCIETLRRVAPLSQVAENRLFVEDGNRFSSAGISTGIDLMLHVVSRLTSLAVAARIAQ 197
           H       R+  P  ++ E++LF+ DG+ ++ AG+S G+DL L +V       +A RIA+
Sbjct: 121 HWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGSDLARRIAR 180

Query: 198 TMVVYLRRNGNDPQISPWLTGRNHMHPAIHRVQ---DRVMAEPARDWSLERLADIAALSE 254
            +V+  RR     Q+S  L     + P   RVQ            D S+E LAD+A LS 
Sbjct: 181 KLVIAQRRGSEQSQLSALL----ELDPKSDRVQLALAYARENLTHDLSVEALADVARLSP 236

Query: 255 RHLSRLFREHTGISVIDYVNLMRVNLARDILSNSRLDMEAIAERAGFASARHLRRVWQQH 314
           R  SR+FRE TG +    +  +RV  AR ++  SR  +E +A   GF     +R+ + + 
Sbjct: 237 RQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQAFLRA 296

Query: 315 NRYPP 319
              PP
Sbjct: 297 FGQPP 301