Pairwise Alignments

Query, 298 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  198 bits (504), Expect = 1e-55
 Identities = 108/257 (42%), Positives = 147/257 (57%), Gaps = 6/257 (2%)

Query: 42  QARSSEGIERIDARFHGNAYAPHRHDTYALGVTLSGVQTFSYRGTSHFSMPGNVIVLHPD 101
           +A  + G++RI+A F G A+ PHRHDTYA+G TL GVQ+F YRG    S+PG  +VLHPD
Sbjct: 13  RAPHASGLDRIEAYFAGFAFDPHRHDTYAIGRTLMGVQSFHYRGDMVHSLPGTTMVLHPD 72

Query: 102 EIHDGGAGTDEGLHYRMLYLPPEKTTE-AGYNTLPFARSAVIEDEEFRQCLTEALGNLDG 160
           E HDG AG+DEG  YRM+Y+ P    +  G   LPF  + +  D    +     L NL+ 
Sbjct: 73  ETHDGHAGSDEGFKYRMIYVEPSLIQQILGGKPLPFIPNGLSTDPRLFRASEVLLQNLEN 132

Query: 161 EPDSLLLTDWQSRLSDLLWKHSN--GSARSIKWIDRAAVLLCRDYLLENSADTVVSQELE 218
             D L     Q  L DL    SN  G+  S K  D  A    R+++      ++   E+ 
Sbjct: 133 PIDPL---QEQDALFDLAHALSNVSGAIISRKTFDYVAAERAREFIHSALGRSITLDEMA 189

Query: 219 QISGLDRFTLFRHFRCVFGTSPHRYLIMRRLQKCKDMMRAGASLAETAFACGFADQAHFT 278
             +G DR+ L R FR +FGTSP+RYL MRRL   + ++  G SL + A   GF DQ+H T
Sbjct: 190 NHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSLVDAAMTAGFTDQSHMT 249

Query: 279 RHFKNAFGMPPGRWLSL 295
           R F++ +GMPP RW+ +
Sbjct: 250 RQFRSTYGMPPSRWVKM 266