Pairwise Alignments

Query, 298 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 9e-39
 Identities = 95/259 (36%), Positives = 130/259 (50%), Gaps = 25/259 (9%)

Query: 48  GIERIDARFHGNAYAPHRHDTYALGVTLSGVQTFSYRGTSHFSMPGNVIVLHPDEIHDGG 107
           GIE + A F G+AY PH HD++ +GVT  GVQ F+ R   H S PG V +L P +IHDG 
Sbjct: 14  GIESVRAHFVGHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGL 73

Query: 108 AGTDEGLHYRMLYLPP---EKTTEAGY-----NTLPFARSAVIEDEEFRQCLTEALGNLD 159
           A T+EG  Y  LYL P   ++   A Y     ++LP     +  DE   +    A   + 
Sbjct: 74  APTEEGFTYSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVH 133

Query: 160 GEPDSLLLTDWQSRLSDLL--------WKHS-NGSARSIKWIDRAAVLLCRDYLLENSAD 210
              D  L    Q+ + DLL        W+   N   R      RA     RD+L  N   
Sbjct: 134 ---DQDLRIVRQTAMDDLLACLTRHLHWRRRINPDPRLPLTAQRA-----RDFLHANLER 185

Query: 211 TVVSQELEQISGLDRFTLFRHFRCVFGTSPHRYLIMRRLQKCKDMMRAGASLAETAFACG 270
            +  ++L Q  G+DRF L R F+  FG +PH YLI  RL + + ++  G + AE A A G
Sbjct: 186 DIGLEDLAQACGIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALG 245

Query: 271 FADQAHFTRHFKNAFGMPP 289
           FADQ+H  R F+ A+ + P
Sbjct: 246 FADQSHLGRWFRRAYQLTP 264