Pairwise Alignments

Query, 293 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 296 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  142 bits (359), Expect = 7e-39
 Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 12/290 (4%)

Query: 1   MNWDDVRIFLAVARSGQILAASKRLGLNHATLSRRLTLLEQALKTQLFIRRTNGCEMTEE 60
           M+WD +++F   A +G    A + LGL+ + +SR+++ LE  LK  LF R   G  +TE+
Sbjct: 1   MDWDKLKVFHVAAEAGSFTHAGETLGLSQSAVSRQVSALEAELKVPLFHRHARGLILTEQ 60

Query: 61  GQRFLGAAERMETEMLNAQANLGRVDTAVAGTVRIGAPDGLGVSFLAPRLGRLTARYPDL 120
           G+     A  +  ++ +A+A L        G +R+    GLG  +L  R+G     +PD+
Sbjct: 61  GELLYRTAHEVFLKLESARAQLTDSREKPNGDLRVTTTMGLGTHWLTARVGEFVELFPDI 120

Query: 121 KIQLVPVPRSFSLSQREADIAITIERPEQGRLMFSKLTDYSLGLYASADYLADHGTPDDV 180
           +IQL+       L+ READ+AI + +P Q  L+  KL       YASADYL  HG P  +
Sbjct: 121 RIQLILTDEELDLAMREADVAIRMRQPVQPDLVQRKLFTVHFHAYASADYLKRHGHPRTL 180

Query: 181 EALKRHRRI---GYVEDLIFSPSLNYTGEIMRDWDA----AFEISSATGQTEAVRSGAGI 233
           + L +HR +   G +    +   LN+     RD       AFE+++  G   AV  G GI
Sbjct: 181 DELDKHRILLLGGPIPS--YFQGLNWLEHAGRDGSTPRIPAFEVNNVLGLKRAVERGVGI 238

Query: 234 GILHNYIAGQYPELMRIMPHLGISR--SYWTAYHESARQLVRVRTVVDFL 281
           G L +Y++     L+++       +  +Y+T Y +  R + R++   DFL
Sbjct: 239 GTLPDYLSDDSTSLVQLFTDRETPKLEAYFT-YAQEMRSVARIQVFRDFL 287