Pairwise Alignments

Query, 348 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 342 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 92/322 (28%), Positives = 140/322 (43%), Gaps = 5/322 (1%)

Query: 13  TALVGSMGALLASLLHIPAPFLSGPALAVTITG-LAGVKLGIPAFIRNACFVVVGISMGT 71
           T LVG  G  LASL+  P P++ G  LA+ +   L   +L      R     VVGI +G 
Sbjct: 12  TPLVGLAGGYLASLVGWPLPYMVGSLLAIILVRCLTPWQLAEIPGGRKCGQWVVGIGIGL 71

Query: 72  SVTPSVIDAAKT-WPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGHLSYII 130
             TP VI+   + + L F   LV  +  + V  W++    G DR TA   + PG    ++
Sbjct: 72  HFTPVVIEQVMSHFGLIFFGALVTSMSSV-VGVWLMRRS-GEDRATAFFSSMPGGSGEMV 129

Query: 131 SLGAETKSDLATVSIVQSVRVLALTLSVPLIVEYFDLVSTEPLITNPPMGFFTLALTIAA 190
           +LGA   + L+ V+  QS+RVL + L VP I +Y  L    P     P+ +  L      
Sbjct: 130 NLGARNGAVLSRVAAGQSLRVLVVVLCVPAIFKYL-LEGGTPQFHPAPVSWPWLLALFPM 188

Query: 191 SLLTGWLFLRWKFPAALLLGGVAISIGTHITGLTEGGVPSWLSLPVYVLIGCLIGTRFSN 250
             L  W + R + P   L G + +S    +      G+P   S     LIG  +G  F+ 
Sbjct: 189 GALVAWGWQRLRQPNPWLFGPLLVSATASVIWDLHIGLPDGGSQIGQWLIGSGLGCHFNR 248

Query: 251 VSLMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGLETMAAMAVM 310
                         + T   M +A   A  +S +T + L ++ +   PGG+  M+  A  
Sbjct: 249 QFFRRAPSFMGRTLIGTALTMALATLAAVGLSALTHLDLRSLTLGMMPGGIAEMSLTAET 308

Query: 311 MHADTAYVGSHHVIRLLFLSVL 332
           +      V +  V+RLLF+  L
Sbjct: 309 LQLSVPLVTAMQVMRLLFVLFL 330