Pairwise Alignments

Query, 303 a.a., ABC transporter, substrate binding protein (proline/glycine/betaine) from Agrobacterium fabrum C58

Subject, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 86/297 (28%), Positives = 128/297 (43%), Gaps = 20/297 (6%)

Query: 5   MTLTGAGLALAFSVSIAQAQVVVSSKIDTEGGVLGNIILAVLNQNKIET-TDRIQLGATP 63
           + LT A LA+A +   A   + V SK  TE  +L  ++      +       R  LG T 
Sbjct: 12  LLLTLAWLAMAPAAHAADDTLRVGSKRFTESYILAELLAQTAAPHTASPPVVRQGLGNTA 71

Query: 64  VVRKAITAGEIDIYPEYTGNAAFFFSKADDPLWKDAAKGYEEAKTLDYDANKIVWLAPSP 123
           +V +A+ +G ID+Y EYTG  A         + K +     EA         +    P  
Sbjct: 72  IVYEALRSGAIDLYAEYTGTIA-------QEILKGSPAESREAMNAALAPMGLGVAIPLG 124

Query: 124 ANNTWAIALRKDVADKNNLKTLSDFGKYVAGGGTVVLAASSEFVNSAAALPAFQTTYGFT 183
            N+ +A+A+R   AD+  L+TLSD  K+      + L  S+EF+  A         YGF 
Sbjct: 125 FNDGYALAVRAADADRLGLRTLSDLAKHPE----LKLGLSNEFIGRADGWKGLAERYGFK 180

Query: 184 MKPDQLITLSGGDTAATIAAAANQTNNANAAMVYGTDGGIAPSGLVVLEDDKHVQPVYQP 243
             P  L         A  A AA Q +   A  +Y TD  I   GL VLEDD+   P Y  
Sbjct: 181 QTPTGL-----DHGLAYDAIAAKQID---AIDIYTTDAKIDHLGLRVLEDDRKYFPRYDA 232

Query: 244 APIIREEVLKKHPNIEELLKPVFEKLDLATLQDLNARVQVGGEQAKTVAMDFLTKNG 300
             + + ++ ++ P     LK +  K+D   +  +NAR ++       +A DFL   G
Sbjct: 233 VVLYKLDLPQRLPEAWAALKTLEGKVDEHAMIAMNARAELQSVPFDAIARDFLAGAG 289