Pairwise Alignments

Query, 381 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 20/226 (8%)

Query: 113 LLATDCIARLEPKPAIRILLLLLAIAALSAILASGLWNDLSIIKEYTGRADIFWIEAVRH 172
           L+  + + RL P   + +L+ LLA  A  ++L S +   L  +    G     W + ++ 
Sbjct: 43  LVGLENLLRLLPWWLLLLLVGLLAWHASRSLLRSAVLVALLALIGMLG----LWDKLLQT 98

Query: 173 VELAIGSLIAATVAGIPLGILCYKVERLRAGVLNSLNIVQTIPSIALFGLLIAPLGWIAA 232
           + L + S     + G+PLGIL       R  +L  L+++QT+P+     + + P+     
Sbjct: 99  LALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPAF----VYLIPV----- 149

Query: 233 TVPGAARIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLAGVSHAIREAARGLGMTPVQRL 292
                  + + G+G  PA  A  +Y+L P+V  T +GL+ +  ++ +AA GLG +  QRL
Sbjct: 150 -------LMLFGLGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRL 202

Query: 293 LRVEFPLAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGI 338
            R+  PLA+P I+ G+   ++  + +  +A++IG  G G  V  GI
Sbjct: 203 RRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGI 248