Pairwise Alignments

Query, 381 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

Subject, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

 Score = 94.4 bits (233), Expect = 9e-24
 Identities = 97/336 (28%), Positives = 140/336 (41%), Gaps = 39/336 (11%)

Query: 52  LAVFFAFFRFPAWLKLAAALAGLAALAVFVGQAASFLTPDGNSFARVSPSS-GFWFLFVG 110
           LA+         W  L    AG   L  F     S L   G   A +  S   F   FVG
Sbjct: 389 LALLLVSQALTVWRALTPEAAG--TLVQFPSDRDSMLAAAGAIDALIGWSQVTFESAFVG 446

Query: 111 LALLATDCIARLE------PKPAIRILLLLLAIAALSAILASGLWNDLSIIKEYTGRADI 164
           + +     I  +E      P P   + L+ LA  +  AILA      L  I  +      
Sbjct: 447 VIVAVRTVINGVEGALGWIPWPVPALALVYLAWRSAGAILALTTALALGYIGLFG----- 501

Query: 165 FWIEAVRHVELAIGSLIAATVAGIPLGILCYKVERLRAGVLNSLNIVQTIPSIALFGLLI 224
           FW   +  + L   S++ + + GIP GIL  K    R  V   L+++QT+P+        
Sbjct: 502 FWERTISTIALVGASVLLSLLIGIPTGILLAKRALARRLVTPLLDVMQTLPTFVYL---- 557

Query: 225 APLGWIAATVPGAARIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLAGVSHAIREAARGL 284
                    +P  A      +G  PA +A  +++L P++  T +G+  V  A  EAA   
Sbjct: 558 ---------IPAVA---FFSVGKTPAVIATVIFALAPMIRLTALGIQEVPKAAVEAAVAH 605

Query: 285 GMTPVQRLLRVEFPLAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGIGQTAMD 344
           G TP Q L RVE PLA   +L G+   +V ++ +  +AALIG GG G  V      TA+ 
Sbjct: 606 GATPWQTLTRVELPLASGSLLLGVNQTIVMSLSMVVVAALIGAGGLGYDV-----MTALR 660

Query: 345 LVLLGTVPTVLLGFAAAITLDALIDSNLFSAGGRQK 380
            +  G    VL G   AI   AL+   +  A  R++
Sbjct: 661 NIKGG--EGVLAGI--AIVFCALVPDRIIQASLRKR 692