Pairwise Alignments

Query, 381 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

Subject, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  130 bits (328), Expect = 3e-35
 Identities = 90/239 (37%), Positives = 127/239 (53%), Gaps = 28/239 (11%)

Query: 134 LLAIAALSAILASGL-WNDLSIIKEYTGRADI-FWIEAVRHVELAIGSLIAATVAGIPLG 191
           LL  AA+  ILA  + W  +  I  Y  R D+ F+++A  H+ L + S+ AA   GIP G
Sbjct: 19  LLGWAAVLVILALLVHWIGIDTIARY--RDDLGFYLQA--HLVLVLASMAAALAVGIPAG 74

Query: 192 ILCYKVERLRAG--VLNSLNIVQTIPSIALFGLLIAPLGWIAATVPGAARIGIAGIGMAP 249
           I   +  R+      +   N+  TIP +A+  + ++                I GIG  P
Sbjct: 75  IALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALS----------------ILGIGAGP 118

Query: 250 AFVALFLYSLLPVVSNTVVGLAGVSHAIREAARGLGMTPVQRLLRVEFPLAMPVILTGIR 309
           A  ALFL SLLP+V NT  GL  V  +++EAA G+GMTP Q+L +VE P A+P+I+ G+R
Sbjct: 119 AIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGVR 178

Query: 310 IVLVQNIGLATIAALIGGGGFGVFVFQGIGQTAMDLVLLGTVPTVLLGFAAAITLDALI 368
           + L  N+G A +A LIG    G  +F GI       +LLG   T LL    A+ LDA +
Sbjct: 179 VALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALL----ALVLDAAV 233