Pairwise Alignments

Query, 246 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 4/179 (2%)

Query: 52  TLSHLTIVAIATGLATLTAGALAVLVT-RPFGADFLPLSRSIVNIGQTFPPVAVLALAVP 110
           T+  L  V  AT +  +    L +L   +P    F    R ++++ QT P    L   + 
Sbjct: 91  TMETLAQVTFATVVCVVIGVPLGILAAHKPM---FYTAMRPVLDLMQTVPTFVYLIPTLT 147

Query: 111 MIGFGEKPTLIALFLYALLPVFENTLTGLTTLPATVMDAARGSGMTGWQRLTKVELPLAL 170
           + G G  P LI+  ++A+      T  G+  +P  +MDA +  G +  Q LT++ELP A+
Sbjct: 148 LFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKAFGCSRRQLLTRIELPHAM 207

Query: 171 PAILAGVRLSAVISLSTATIGSTVAARTLGEVIIAGLQSNNLAFILQGGLIVAALAILI 229
           P+I AGV    ++SLS   I + V A  LG+ ++  L + +++   + GL +  LAI++
Sbjct: 208 PSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLAIVLLAIML 266