Pairwise Alignments

Query, 381 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 346 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  335 bits (858), Expect = 1e-96
 Identities = 173/356 (48%), Positives = 229/356 (64%), Gaps = 26/356 (7%)

Query: 25  KRRWQNFKANRRGYWSFWLFLILFFLSLIAEFIANDKPILASYKGEILVPVMVDYPEEKF 84
           +R W  FK NR G+WS  +F ++  LSL AE ++ DKP++  Y+G    PV+ DY E+ F
Sbjct: 12  RRAWLRFKRNRLGFWSLVIFTVMVVLSLFAEVLSTDKPLVLRYEGRTYFPVLRDYSEKTF 71

Query: 85  GG-FLAQTDYKSSFIQDEIN-ANGWMIWPPIRYSYQTVNSNIPHSAPTAPFWLMDEKERC 142
           GG F    DY   +I+D I   + W I+ P  Y  +T+N      +P AP          
Sbjct: 72  GGDFETPADYLDPYIRDRITQGDNWAIYAPNPYGPKTLNYFAKAPSPAAP---------- 121

Query: 143 SAYPQGNADPGCTLGNLNWLGTDNQARDVTARMIYGFRISVLFGLTLTIASALVGVTAGA 202
                  AD        N  GTD++ RD+ A++IYGFR+SVLFGL LT    ++GV AGA
Sbjct: 122 ------TAD--------NIFGTDDRGRDLLAQLIYGFRVSVLFGLALTAIGTVLGVAAGA 167

Query: 203 IQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILPPGFFVLLGIMLLFSWVGFVGIVR 262
           +QGYF G  DL  QRFIEIWSSMP LY+L+I +AI  P   +LL ++ LF W+G    VR
Sbjct: 168 VQGYFAGKVDLAFQRFIEIWSSMPELYLLIIFSAIFAPSVALLLILLSLFGWMGLADYVR 227

Query: 263 AEFLRARNFEYVRAARALGVGNWTIMFRHLLPNAMVATLTFLPFILSGSITTLTSLDFLG 322
           AEFLR R  +YVRAARALGV N  IM+RH+LPN+MV  +TFLPF +S +I  LTSLDFLG
Sbjct: 228 AEFLRNRQMDYVRAARALGVSNLQIMWRHILPNSMVPVVTFLPFRMSAAILALTSLDFLG 287

Query: 323 FGMPPGSPSLGEMIAQGKNNLQAPWLGLTAFFTMSIMLSLLIFVGEAVRDAFDPRK 378
            G+PPG+PSLGE+++QGK N+ A W+ ++ F  + + L LL F+G+A+RDA DPRK
Sbjct: 288 LGVPPGTPSLGELLSQGKANIDAWWISISTFGVLVVTLMLLTFMGDALRDALDPRK 343