Pairwise Alignments

Query, 381 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 6e-40
 Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 161 WLGTDNQARDVTARMIYGFRISVLFGLTLTIASALVGVTAGAIQGYFGGWTDLLLQRFIE 220
           WLGTD   RDV +R+IYG R+S+L G    + + +VG   G I GY GG TD L+  F++
Sbjct: 67  WLGTDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVD 126

Query: 221 IWSSMPVLYILLIIAAILPPGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARAL 280
           +  S P L + L++AA+L      L+  + +     FV I RA  +  +  ++V A R+L
Sbjct: 127 VLLSFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSL 186

Query: 281 GVGNWTIMFRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGK 340
           G G   +M  H+LPN +   L      ++ +I T  SL F+G G+PP +P+ G MI +G 
Sbjct: 187 GYGPGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGF 246

Query: 341 NNLQAPWLGLTAFFTMSIMLSLLI--FVGEAVRDAFDPR 377
            N+   W  LT F +++I+L++L    +G+A+RDA DP+
Sbjct: 247 ENILDAW-WLTVFPSLAILLTVLALSLLGDALRDANDPK 284