Pairwise Alignments

Query, 381 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 303 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  126 bits (317), Expect = 7e-34
 Identities = 72/253 (28%), Positives = 134/253 (52%), Gaps = 9/253 (3%)

Query: 128 APTAPFWLMDEKERCSAYPQGNADPGCTLGNLNWLGTDNQARDVTARMIYGFRISVLFGL 187
           A  AP+    + E    Y + N  P      L+W G D+  RD+ +R++ G +IS+  G+
Sbjct: 54  AVIAPWVAPFDAENYFDYDRLNDGPSM----LHWFGVDSLGRDIFSRVLVGAQISLAAGV 109

Query: 188 TLTIASALVGVTAGAIQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILPPGFFVLLG 247
              +  A +G   G + GY+ GW D ++ R  ++  + P + + + + AI+  G   ++ 
Sbjct: 110 FAVLIGAAIGTVLGLVAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAIMGSGMANVII 169

Query: 248 IMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVGNWTIMFRHLLPNAMVATLTFLPFI 307
            + +FS   F  +VR   L  +   ++ +AR++G  + TI+F H+LP  + + + +    
Sbjct: 170 AVAVFSIPAFARLVRGNTLVLKQQTFIESARSMGASDATILFSHILPGTVSSIVVYFTMR 229

Query: 308 LSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKNNLQ-APWLGLTAFFTMSIMLSLLIF- 365
           +  SI +  SL FLG G  P +P  G M+ + + ++  AP + +  F +++I L++L F 
Sbjct: 230 IGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAI--FPSLAIFLTVLAFN 287

Query: 366 -VGEAVRDAFDPR 377
            +G+ +RDA DPR
Sbjct: 288 LLGDGLRDALDPR 300