Pairwise Alignments

Query, 364 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 357 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

 Score =  474 bits (1221), Expect = e-138
 Identities = 235/363 (64%), Positives = 288/363 (79%), Gaps = 7/363 (1%)

Query: 1   MGAYILRRLALMIPTIVGIMGISFLVIQFAPGGPVEQVVAQLTGQGDSASDRLSGGGDLM 60
           M AYILRRL L+IPT+ GI+ I+F+++Q APGGPVEQ++A+L G  + A+ R++GGG   
Sbjct: 1   MLAYILRRLLLIIPTLFGILIINFIIVQAAPGGPVEQMIAKLEGF-EGATSRIAGGG--- 56

Query: 61  GQSGGFDESGSKYRGAQGLDPELIKKLEKQFGFDKPPLTRFLEMMWNYIRFDFGDSFFRN 120
                   +GS YRGAQGLDP LI ++E+ +GFDK P  R   M+ NY + DFGDSFFR+
Sbjct: 57  ---AEVSVAGSSYRGAQGLDPALIAEIERMYGFDKSPPERLWIMVKNYAQLDFGDSFFRD 113

Query: 121 SSVIDLIIDKLPVSASLGFWILIISYVISIPLGIKKAVSDGSTFDVWTSGIIIIGYAVPS 180
           + VIDLI +K+PVS SLG W  +I Y++SIPLGI KAV  GS FDVWTS  II+GYA+P+
Sbjct: 114 AKVIDLIAEKMPVSISLGLWSTLIMYLVSIPLGIAKAVRHGSHFDVWTSSAIIVGYAIPA 173

Query: 181 FLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLPLIALSLSAFAT 240
           FLF ILLIVLFAGGS+FDWFPLRGL S+NFD+L+   K++DYFWHL LP+ AL +  FAT
Sbjct: 174 FLFAILLIVLFAGGSYFDWFPLRGLTSNNFDELSTTGKVLDYFWHLVLPITALVIGNFAT 233

Query: 241 TTLLTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFPGAFISAFFTGS 300
            TLLTKNSF+DEI KQYVVTA+AKGLS  +VLYGHVFRNAML+VIAGFP AFI  FFTGS
Sbjct: 234 MTLLTKNSFLDEINKQYVVTAKAKGLSRSRVLYGHVFRNAMLLVIAGFPSAFIGIFFTGS 293

Query: 301 LLIENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLIYTWIDPRIDFE 360
           LLIE IFSLDGLG + + + +NRDYP+VFGTLFIF+L+GLVV L+ DL YT +DPRIDF 
Sbjct: 294 LLIEVIFSLDGLGLMSFEAAINRDYPVVFGTLFIFTLLGLVVKLIGDLTYTLVDPRIDFA 353

Query: 361 RRD 363
            R+
Sbjct: 354 SRE 356