Pairwise Alignments

Query, 614 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 625 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum PSI07

 Score =  391 bits (1004), Expect = e-113
 Identities = 232/603 (38%), Positives = 334/603 (55%), Gaps = 23/603 (3%)

Query: 25  ASAQSTDVWRK-GISTVGELKHPDGFDHFDYVNTKAPKGGTLRLSTSG---TFDTLNPLL 80
           AS  +   W   G +  G+LK+P GF HF Y+N KAP GGTL L       +FD  NP  
Sbjct: 20  ASLSAASAWAAHGYAEYGDLKYPAGFTHFAYLNPKAPIGGTLALGNPDRRTSFDKFNPFT 79

Query: 81  AKGERATGLS-LVYDTLMKSTEEELSASYGLLAEGVSYPDDIEKATFRLRQDAKWADGKP 139
            KG  A GL+ LV+++L+  + +E ++ YGLLA+ V+   D    TF L   A++++G P
Sbjct: 80  IKGTAAPGLNALVFESLLIGSWDETASGYGLLADDVTVAPDELSVTFHLNPLARFSNGDP 139

Query: 140 VTPEDVVFSFEK--AKDLSPQLATYYTHVTKAEVSGERDITFTFDEKNNRELPQIVGQLL 197
           V   DV +S++    K  SP   +    V++  V  ER I + F ++ N+ELP IVG L 
Sbjct: 140 VRAADVKYSYDMLMGKGASPAYRSMTADVSRVTVVDERTIRYDF-KRRNKELPLIVGNLP 198

Query: 198 IVPKHWWEGTGPD-----GKPRDISRGTLEPVMGSGPYKIAAVSPGSSVTYERRDDYWGK 252
           +    W +G+G       GK     + T +  +GSGPY I        +T+ R  DYWG+
Sbjct: 199 VFSPKWGKGSGKPEDPAGGKDTPFDKITFQEPIGSGPYLIERYDGARGITFRRNPDYWGR 258

Query: 253 DVNVNVGMNNFKTIAYTFFADQDVEFQAFKSGTVDFRQEASSSRWVTGYDFPAVKEGRVK 312
           +++V  G  NF+ I Y  + D+    +AFK+G  D   E  +  W   Y     + G + 
Sbjct: 259 NLSVRRGAYNFERIQYKLYKDETARLEAFKAGEYDAMVEYRAKNWAKSYVGVKFRSGELV 318

Query: 313 KEELPNIYRSVGIMQAFVPNMRREKFQNPKLRKALNYAFDFEELNRTLAYGQFQRITSFF 372
           K E P  +R+   MQ FV N+R+  F++P++R+AL  A DFE LNR L YG ++R+ S+F
Sbjct: 319 KSEFP--HRNGAGMQGFVMNLRKPIFRDPRVRRALALALDFEWLNRQLFYGAYRRLDSYF 376

Query: 373 MGSELASS----GLPTGRELEILQELKDQVPPEVFTTEYRNPVAGDPAKQRDNLREAVKL 428
             SELA+S    G+P   EL +L+ L+ ++ PEVF      P    P   RDNLR+A +L
Sbjct: 377 ANSELAASDSITGMPGKGELALLEPLRGKLDPEVFGVLPAPPSTDPPGSLRDNLRQARRL 436

Query: 429 MKEAGYELRGNRMVNAATGQQLDMEFLIDSSGMERTILPYVQNLKKIGINATIRTVDASQ 488
           + +AG+      + NA  G+    E L D   M R +  YV+NL+K+GI    R  D + 
Sbjct: 437 LAQAGWTYDDGALRNAK-GEPFTFEMLDDGGAMSRVMAAYVRNLEKLGIRVNQRITDYAL 495

Query: 489 YTNRTRSFDFDVTIKLWATSANPGNEQADFWGSAAADRQGSNNLAGIKNPAVDALVRKVI 548
           Y  R   FDFD+    +  S +PGNE  D +GSAAAD  GS+N+ G+K+PAVDAL+  V+
Sbjct: 496 YQKRLEEFDFDMISLRFPDSQSPGNELKDRFGSAAADEPGSDNVIGLKSPAVDALIDDVL 555

Query: 549 FAPNRDEQVAAARALDRVLLANSYVIPQFYRGEMFIAYWNTLIRPENLPEY--GVGFP-D 605
            + NR+E V A+RALDRVL+   YVIP +Y     +AY   L+ P+ LP Y    G+   
Sbjct: 556 RSGNREELVTASRALDRVLMQGCYVIPHWYSPTHRVAYNRNLMYPDRLPYYYSAEGWVLT 615

Query: 606 AWW 608
           AWW
Sbjct: 616 AWW 618