Pairwise Alignments

Query, 614 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 612 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  457 bits (1175), Expect = e-133
 Identities = 246/567 (43%), Positives = 341/567 (60%), Gaps = 12/567 (2%)

Query: 44  KHPDGFDHFDYVNTKAPKGGTLRLSTSGTFDTLNPLLAKGERATGLSLVYDTLMKSTEEE 103
           K+P  F HFDYVN  APKGGT R S  G FD+LNP ++KG  A  LSL+YDTL   + +E
Sbjct: 34  KYPADFKHFDYVNPDAPKGGTFRESAMGGFDSLNPYISKGVPADNLSLIYDTLAMQSLDE 93

Query: 104 LSASYGLLAEGVSYPDDIEKATFRLRQDAKWADGKPVTPEDVVFSFEKA-KDLSPQLATY 162
               YGL+A  +    D     F LR +A++ DG P+  EDVVF+F++  K+ SP   TY
Sbjct: 94  PITEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGNPIRAEDVVFTFQELIKEGSPIYRTY 153

Query: 163 YTHVTKAEVSGERDITFTFDEKNNRELPQIVGQLLIVPKHWWEGTGPDGKPRDISRGTLE 222
           Y  V +        + F F   NNRELP I+GQL ++PKHWW         RD ++G LE
Sbjct: 154 YADVDEVIAEDPLKVLFKFKRTNNRELPLILGQLPVLPKHWWA-------TRDFAKGNLE 206

Query: 223 PVMGSGPYKIAAVSPGSSVTYERRDDYWGKDVNVNVGMNNFKTIAYTFFADQDVEFQAFK 282
             +GSGPYK+A V  G  + YER  DYW KD+ V  G  NF      ++ D  V  +A K
Sbjct: 207 VPLGSGPYKVAEVKAGRMIRYERVKDYWAKDLPVTQGFYNFDNRITDYYRDSTVSLEALK 266

Query: 283 SGTVDFRQEASSSRWVTGYDFPAVKEGRVKKEELPNIYRSVGIMQAFVPNMRREKFQNPK 342
           +G  D+  E S+  W   Y+ PAV EGR+ KEE+PN   +   MQ FV N R+  FQ+ +
Sbjct: 267 AGQFDYWLEFSAKNWANAYNIPAVAEGRLIKEEIPN--GNPTGMQGFVFNTRKPMFQDVR 324

Query: 343 LRKALNYAFDFEELNRTLAYGQFQRITSFFMGSELASSGLPTGRELEILQELKDQVPPEV 402
           +RKA++   DFE  N+ L  G + R  S+F  SE+A++GLP   EL IL+ L+D++PPEV
Sbjct: 325 VRKAISLLLDFEWSNKQLFNGAYTRTRSYFENSEMAATGLPGPDELAILEPLRDKIPPEV 384

Query: 403 FTTEYRNPVAGDPAKQRDNLREAVKLMKEAGYELRGNRMVNAATGQQLDMEFLIDSSGME 462
           FT  +           R+  REA +L+++AG+ +  ++MV+  TG+ + +EFL+  +  E
Sbjct: 385 FTQAFEPSKTDGSGMIRNQQREAYQLLQDAGWRIVDDKMVDT-TGKPVKIEFLLAQTEFE 443

Query: 463 RTILPYVQNLKKIGINATIRTVDASQYTNRTRSFDFDVTIKLWATSANPGNEQADFWGSA 522
           R +LP+ +NL  +GI+  IR VD SQ+ NR RS DFD+ +  +  S +PGNEQ +FW S+
Sbjct: 444 RILLPFKRNLADLGIDLVIRRVDVSQFVNRIRSRDFDMLVGSFPQSTSPGNEQREFWKSS 503

Query: 523 AADRQGSNNLAGIKNPAVDALVRKVIFAPNRDEQVAAARALDRVLLANSYVIPQFYRGEM 582
           +AD+ GS N  G+K+PAVD LV ++I A +R   VA A+ALDRVL    YVIP ++    
Sbjct: 504 SADKPGSRNYMGLKDPAVDQLVEELIDAHSRKSLVAHAKALDRVLQFGYYVIPNWHIKTY 563

Query: 583 FIAYWNTLIRPENLPEYGVGFPDAWWS 609
            +AYWN L  P+  P Y VG    WW+
Sbjct: 564 RVAYWNHLGHPKVPPRYDVG-TATWWA 589