Pairwise Alignments

Query, 614 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 619 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  372 bits (955), Expect = e-107
 Identities = 223/594 (37%), Positives = 336/594 (56%), Gaps = 22/594 (3%)

Query: 9   RILIALAASALLIPAVASAQSTDVWRKGISTVGE-LKHPDGFDHFDYVNTKAPKGGTLRL 67
           R+  +   S+ L   +AS+      +  ++  GE  K+P GF HFDY N  APKGG+LR 
Sbjct: 2   RLAFSYMLSSTLALLLASSAVIAAPQPYLTVYGEPAKYPAGFTHFDYANPNAPKGGSLRR 61

Query: 68  STS--GTFDTLNPLLAKGERATGLSLV----YDTLMKSTEEELSASYGLLAEGVSYPDDI 121
           S    G FD + P + KG    G+S V    Y  L + + +E    YGL+AE +   DD 
Sbjct: 62  SAIEIGRFDHVLPYIDKG---IGVSQVDGWLYAPLAQRSLDEPYTVYGLVAEKMERADDG 118

Query: 122 EKATFRLRQDAKWADGKPVTPEDVVFSFEKAKDL-SPQLATYYTHVTKAEVSGERDITFT 180
               F L   A++ADGKP+T EDV +SF+      S +  T +  V   EV GER + F 
Sbjct: 119 LSLRFFLNPKARFADGKPITAEDVRYSFDLLMTQGSLRFRTLFADVKHVEVEGERQVRFD 178

Query: 181 FDEKNNRELPQIVGQLLIVPKHWWEGTGPDGKPRDISRGT-LEPVMGSGPYKIAAVSPGS 239
           F    NR LP  +  L + P+HWW       K RD + G   E  +GSGPYK++ +  GS
Sbjct: 179 FSSNENRTLPLDIATLPVFPEHWW-------KTRDFANGGGYEAPLGSGPYKVSKIDSGS 231

Query: 240 SVTYERRDDYWGKDVNVNVGMNNFKTIAYTFFADQDVEFQAFKSGTVDFRQEASSSRWVT 299
           ++T+ R  ++WGKD+ V+ G+ NF  ++  +F D +V  Q  + G  DF +E S++ +  
Sbjct: 232 TITFTRDPNWWGKDLPVSRGLYNFDHLSLEYFGDTEVARQVLRGGAYDFNREFSATGYSI 291

Query: 300 GYDFPAVKEGRVKKEELPNIYRSVGIMQAFVPNMRREKFQNPKLRKALNYAFDFEELNRT 359
           GY+ PA+ +GR+++  L          Q +V N+++  F++ ++R+AL   +DFE  NR 
Sbjct: 292 GYNGPALDDGRLQRAHLAKEMPQPA--QGYVFNVQKPVFKDRRVRQALAMLWDFEWANRQ 349

Query: 360 LAYGQFQRITSFFMGSELASSGLPTGRELEILQELKDQVPPEVFTTEYRNPVAGDPAKQR 419
           +    + R  SFF  S LA+S  PT  EL IL+ L+ QVP EVFT  ++ PV       R
Sbjct: 350 MMRNMYIRQQSFFSNSPLAASQPPTQEELAILEPLRGQVPDEVFTQVFKAPVTDGSGMIR 409

Query: 420 DNLREAVKLMKEAGYELRGNRMVNAATGQQLDMEFLIDSSGMERTILPYVQNLKKIGINA 479
           D   +A+ L++EAG++  G+++VNA  G+ L+  FL   SG+ER +LPY +NL +IGI  
Sbjct: 410 DKQLQALALLEEAGWKPDGDKLVNAE-GEPLEFTFLNAQSGLERLLLPYKRNLAQIGITL 468

Query: 480 TIRTVDASQYTNRTRSFDFDVTIKLWATSANPGNEQADFWGSAAADRQGSNNLAGIKNPA 539
            IR +DASQY NR  + D+D+ +  +  + +PG E  +++GSAAA   G+NN   +K+PA
Sbjct: 469 NIRRIDASQYVNRVMARDYDMIVTGFPVTTSPGMELYNYFGSAAAFDPGANNYMVLKDPA 528

Query: 540 VDALVRKVIFAPNRDEQVAAARALDRVLLANSYVIPQFYRGEMFIAYWNTLIRP 593
           VD+L++ ++ A  + + +  A ALDRVL  N   IP +Y      A+WN   RP
Sbjct: 529 VDSLIKGLVKADTQAQMLTYAHALDRVLQWNYLWIPNYYPPGTSAAWWNRFGRP 582