Pairwise Alignments

Query, 258 a.a., ABC transporter, nucleotide binding/ATPase protein (phosphonate) from Agrobacterium fabrum C58

Subject, 350 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  150 bits (380), Expect = 3e-41
 Identities = 100/266 (37%), Positives = 142/266 (53%), Gaps = 18/266 (6%)

Query: 2   SDAPLLKVRDVSKYYGDRAG----CRNVSFELYPGEVLAIVGESGSGKTTLLNCISTRLM 57
           SD+ LL+V+D+   +  R G       V FE+  GE L +VGESG GK+     +  RL+
Sbjct: 5   SDSTLLRVQDLHVEFKTRRGQALVLNGVDFEIRAGETLCVVGESGCGKSMTALAL-LRLI 63

Query: 58  PTAGSVEYRMRDGSV----RDLYHMGEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVG 113
           P+      R+R G V     DL    +A  R +       + Q P   L    + G  +G
Sbjct: 64  PSPPG---RIRSGQVLFQGEDLVQASDARMREVRGNRISMIFQEPMTSLNPVFTVGEQIG 120

Query: 114 E--RLMAVGNRHYGNIRQSASEWLERVEIGTD--RIDDQPRAFSGGMRQRLQIARNLVTS 169
           E  RL A  N H  + R  A E L +V I     R+D+ P   SGGMRQR+ IA  L   
Sbjct: 121 ESLRLHAGLNAHAASER--AIEMLRQVGIPAPERRVDEYPHQLSGGMRQRVMIAMALACR 178

Query: 170 PRLVFMDEPTGGLDVSVQARLLDLVRGLVNDLGLAVVVVTHDLAVARLLSHRMMVMKGGD 229
           P ++  DEPT  LDV+VQA++ DL+R L  D G A++++THD+     ++ R+MVM  G 
Sbjct: 179 PDILIADEPTTALDVTVQAQIFDLLRELQRDKGTAIMLITHDMGAVAEMADRVMVMYAGR 238

Query: 230 VIEHGLTDRVLDDPREPYTQLLVSSI 255
           VIE G T++VL +P  PYT+ L+  +
Sbjct: 239 VIEQGTTEQVLSEPGHPYTRGLIDCL 264