Pairwise Alignments

Query, 258 a.a., ABC transporter, nucleotide binding/ATPase protein (phosphonate) from Agrobacterium fabrum C58

Subject, 325 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  141 bits (355), Expect = 2e-38
 Identities = 92/257 (35%), Positives = 137/257 (53%), Gaps = 13/257 (5%)

Query: 4   APLLKVRDVSKYYG--DRA--GCRNVSFELYPGEVLAIVGESGSGKTTLLNCISTRLMPT 59
           APL++VR + KY+G  DR      +VSF + PGE L +VGESGSGK+T+   +   L  T
Sbjct: 5   APLIEVRGLKKYFGSSDRPVRAVDDVSFAIQPGETLGLVGESGSGKSTIGRTVLRLLERT 64

Query: 60  AGSVEYRMRD-GSVRDLYHMGEAERRFLMRTDWGFVHQNPADGLRMAVSAGANVGERLMA 118
           +G V YR  D G++         ER   +R+    + Q+P   L   +   A +GE L  
Sbjct: 65  SGQVLYRGDDIGAL-------SGERMRKLRSKLQIIFQDPYASLNPKMRISAILGEALST 117

Query: 119 VGNRHYGNIRQSA-SEWLERVEIGTDRIDDQPRAFSGGMRQRLQIARNLVTSPRLVFMDE 177
            G       R    +E LE V +  +     P  FSGG RQR+ +AR L   P  +  DE
Sbjct: 118 HGLHKGAAARDKRIAELLETVGLRAEHASRFPHEFSGGQRQRIGVARALAVEPEFIVADE 177

Query: 178 PTGGLDVSVQARLLDLVRGLVNDLGLAVVVVTHDLAVARLLSHRMMVMKGGDVIEHGLTD 237
           P   LDVS+Q+++++L+  L   LGL ++ ++HDL V   L  R++V+  G V+E   TD
Sbjct: 178 PLSALDVSIQSQVINLLADLRERLGLTMLFISHDLDVVEYLCDRVVVLYLGKVMEVATTD 237

Query: 238 RVLDDPREPYTQLLVSS 254
            +   P  PYT+ L+++
Sbjct: 238 ELFARPSHPYTRALLAA 254