Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 79/334 (23%), Positives = 146/334 (43%), Gaps = 7/334 (2%)

Query: 9   EISVVAGLAAGVSNYARSRGIDIVPICKALDIDPATFSSLTERISLDRFSRLLETCALIS 68
           E +  A  A G+       G+D   + K L +D A  S    R   D  +RL +    +S
Sbjct: 3   ERTTSASWAMGIVKALEMDGLDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELS 62

Query: 69  GDDAFGLQCAATFPAGASGAFGYGLISAPTV-RSFLRFLQ-DHVYYATNNSNFTMVADAT 126
           G+ A GL         +    GY L+S+ T+   F+R ++   +   + + +F +V +  
Sbjct: 63  GNPAIGLNMGKVVRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEGY 122

Query: 127 QVTLSWSFAPGIAKRDQYVDLSLAVLVQRLRDILGERVNQIEIGLERQKPINIQLFKERL 186
            + L+      +    Q  + SLA  +     + G  +   ++ L+ ++P ++  +K+  
Sbjct: 123 ALILT-VHGDHLPPTRQSAEASLASALALCGWLTGRTLQPRKVVLQGEQPADLAPYKQAF 181

Query: 187 TRRVSFSQAIHTMRLPASLLDVANPNADERLFELMN-LQCRMLRPETSADPTHFIDQVKR 245
              + F+     +    + +D   P A+E +  L +      L   + +  TH   QV  
Sbjct: 182 HAPLEFNAPYDALIFERADMDAPLPTANEAMALLHDRFAGEYLARFSESRVTHKARQV-- 239

Query: 246 YMQMRLSDAELSLGEIAPYFNLSERSFQRRLAELGTNLNEIKDAIRKNAGFKLLVESDLP 305
            +   L   E     +A   +LS+R+ QRRL E GT+   + D  R+    + L +  + 
Sbjct: 240 -LCRLLPQGEPKREVVAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMT 298

Query: 306 VSDISYRLGYSTPGAFSRSVSRWFGATPTDIRRK 339
           + +I+Y LG++ P  F R+  RWF ATP + R +
Sbjct: 299 LLEIAYLLGFADPSNFFRAFRRWFDATPGEYRAR 332