Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 363 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 66/337 (19%), Positives = 128/337 (37%), Gaps = 9/337 (2%)

Query: 15  GLAAGVSNYARSRGIDIVPICKALDIDPATFSSLTERISLDRFSRLLETCALISGDDAFG 74
           G AA V    +S G     + +   +D +   S + ++S  +   +L     +S      
Sbjct: 22  GTAACVMALTQS-GASASELLRGTGLDESELLSYSRKVSYAQMQTILRNAVALSPGPEAA 80

Query: 75  LQCAATFPAGASGAFGYGLISAPTVRSFLRFLQDHVYYATNNSNFTMVADATQVTLSWSF 134
            +        + G +G G+ SA T R    F+  + +       F            W++
Sbjct: 81  FEAGRRVSLASLGVWGLGMTSARTYRELAEFVVKYQWVLGPMVAFDF--HEVDANAWWTY 138

Query: 135 APGIAKRDQYVDLSLAV-----LVQRLRDI-LGERVNQIEIGLERQKPINIQLFKERLTR 188
            P +    +  +  +++     +  R+ +I  G     + I L    P +  L++     
Sbjct: 139 TPLLVSDPRSTEYQMSMEFALCMGYRMSEIAFGPGFKALAISLRYDAPAHASLYEHFFGC 198

Query: 189 RVSFSQAIHTMRLPASLLDVANPNADERLFELMNLQCRMLRPETSADPTHFIDQVKRYMQ 248
            + F Q         +LL+   PNA+     ++   C +L  + S          +    
Sbjct: 199 PILFGQPHDGFHFDPALLECELPNANAISMAMVRAGCEVLLKKLSTRGGIEARVRELLSA 258

Query: 249 MRLSDAELSLGEIAPYFNLSERSFQRRLAELGTNLNEIKDAIRKNAGFKLLVESDLPVSD 308
            R     L++ EIA   +++ R+  R+L E GT+   ++  +  +     L ++DL   +
Sbjct: 259 QRPEKPALAVDEIANELDMNPRTLHRKLKEAGTSFRGLRSNVLMDQAIAYLRDTDLTQEE 318

Query: 309 ISYRLGYSTPGAFSRSVSRWFGATPTDIRRKHAHHSA 345
           I+ RLG+S    F ++  RW    P D R K    +A
Sbjct: 319 IAARLGFSDGSNFRQAFKRWTNRQPGDFRPKRGAGAA 355