Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 72/323 (22%), Positives = 136/323 (42%), Gaps = 13/323 (4%)

Query: 20  VSNYARSRGIDIVPICKALDIDPATFSSLTERISLDRFSRLLETCA-LISGDDAFGLQCA 78
           + N  ++ G +   +     I PA       RI+  +    L+ CA  ++  +  GL+  
Sbjct: 41  ILNVFQADGCEASALLAGSGIGPADLGHADARITTQQE---LQVCANAVARREDIGLELG 97

Query: 79  ATFPAGASGAFGYGLISAPTVRSFLRFLQDHVYYATNNSNFTMVADATQVTLS---WSFA 135
                   G  GY L+S+ T+   LR    +           ++ D  +V  S   +  +
Sbjct: 98  QRMRVSCYGMLGYALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVWFSASDYQDS 157

Query: 136 PGI-AKRDQYVDLSLAVLVQRLRDILGERVNQIEIGLERQKPINIQLFKERLTRRVSFSQ 194
           P + A   ++  +SL V+     D+LG  +  +    E  +P    L+       + F+ 
Sbjct: 158 PALSAFNAEFCLVSLKVICD---DLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAA 214

Query: 195 AIHTMRLPASLLDVANPNADERLFELMNLQCRMLRPETSADPTHFIDQVKRYMQMRLSDA 254
             +        LD+  P AD    + M+ +CR L  E +     ++ ++++ +  +L DA
Sbjct: 215 EDNAFAFERRWLDMPLPLADPITHKAMSERCRRLNLEFTGRQA-WLGRIRQLLAQQL-DA 272

Query: 255 ELSLGEIAPYFNLSERSFQRRLAELGTNLNEIKDAIRKNAGFKLLVESDLPVSDISYRLG 314
              L  +A   N S R+ +R L  LG++  ++ D +R     +LL +  +P+  I+  LG
Sbjct: 273 APGLEGLARQMNCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLG 332

Query: 315 YSTPGAFSRSVSRWFGATPTDIR 337
           +S   +F  +  RW G  P+  R
Sbjct: 333 FSETASFRHAFQRWSGVAPSHFR 355