Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 5/306 (1%)

Query: 36  KALDIDPATFSSLTERISLDRFSRLLETCALISGDDAFGLQCAATFPAGASGAFGYGLIS 95
           K L +D A       R   D  +RL +    +SG++A GL  A      +    GY L+S
Sbjct: 3   KQLGLDFAALDDPDARFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYALMS 62

Query: 96  APTVRSFLRFLQDHVYYATNNSNFTMVADATQVTLSWSF-APGIAKRDQYVDLSLAVLVQ 154
           + T+      L  +      +S+ + V      +L  +     +       + SLA  + 
Sbjct: 63  SRTLAEGFERLVRYQRIIAESSDLSFVLGPEGYSLILTVHGDHLPPTRHSAEASLACALA 122

Query: 155 RLRDILGERVNQIEIGLERQKPINIQLFKERLTRRVSFSQAIHTMRLPASLLDVANPNAD 214
             + + G  V    + ++  +P N++ +K      + F      +    + ++   P A+
Sbjct: 123 LCKWLSGRPVQPRRVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLPTAN 182

Query: 215 ERLFELMN-LQCRMLRPETSADPTHFIDQVKRYMQMRLSDAELSLGEIAPYFNLSERSFQ 273
           E +  L +      L   + +  +H + QV   +   L   E     +A   +LS+R+ Q
Sbjct: 183 EAMAVLHDRFAGEYLARFSESRVSHRVRQV---LCRILPQGEPKRETLAQALHLSQRTLQ 239

Query: 274 RRLAELGTNLNEIKDAIRKNAGFKLLVESDLPVSDISYRLGYSTPGAFSRSVSRWFGATP 333
           RRL E GT+   + D  R+    + L +  + + + +Y LG++ P  F R+  RWF ATP
Sbjct: 240 RRLQEEGTSFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDATP 299

Query: 334 TDIRRK 339
           ++ R +
Sbjct: 300 SEYRAR 305