Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 346 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 21/347 (6%)

Query: 9   EISVVAGLAAGVSNYARSRGIDIVPICKALDIDPATFSSLTERISLDRFSRLLETCALIS 68
           E+SV  G    +S   R  G D  P+ +   +D    S    R+S+ R+  +      +S
Sbjct: 10  ELSV--GFVQPLSEALRELGHDPEPLLRRYGLDATRLSEAGARLSIPRYMHMGHAAIEMS 67

Query: 69  GDDAFGLQCAATFPAGASGAFGYGLISAPTV----RSFLRFLQDHVYYATNNSNFTMVAD 124
           G+ A GL+         +G  G     APT+    R+ LRF  + +Y A    +     D
Sbjct: 68  GEAALGLRMGRLSRLAHTGLAGVTAAQAPTLGEAARTLLRF--EPLYAANYRGHSRFEED 125

Query: 125 ATQVTLS-WSFAPGIAKRDQYVDLSLAVLVQRLRDILGERVNQIEIGLERQKPINIQLFK 183
           A    L  +S +P        VD  LA  + +L ++ G  V    + +E   P     ++
Sbjct: 126 AQGAWLRFYSISPYNDYNRFVVDSLLAGWLAQLAELAGTPVQAERLEIEFAAPSYAARYQ 185

Query: 184 ERLTRRVSFSQAIHTMRLPASLLDVANP----NADERLFELMNLQCRMLRPETSADP--T 237
              +  V F+   + +RL  + L +ANP    +  + L +L   +        S     T
Sbjct: 186 PLCSTPVQFAADGNQLRLSRATLQLANPGHCPSTWQHLLQLCEAELLQRTRVRSLGERIT 245

Query: 238 HFIDQVKRYMQMRLSDAELSLGEIAPYFNLSERSFQRRLAELGTNLNEIKDAIRKNAGFK 297
           H +  +           E  L E+A +  L   + +R+LAE GT   ++ +  R++    
Sbjct: 246 HLLGPLLN------GGREPDLEEVALHLQLPSWTLRRKLAEEGTRFRDLLNETRRDLAET 299

Query: 298 LLVESDLPVSDISYRLGYSTPGAFSRSVSRWFGATPTDIRRKHAHHS 344
            + ++ L   +I+Y LG+++  AF R+  RW G TP + RR     S
Sbjct: 300 YIRDTALAFGEIAYLLGFASAEAFQRAFKRWTGLTPGEFRRSQRQPS 346