Pairwise Alignments

Query, 333 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 338 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 20/260 (7%)

Query: 20  IMKRTWVIAAIATLVSSASAYAETA----VTIGMSG--WTGFAPLTLAKQAGIFEKNGLK 73
           ++K      A+A  V +A+  A  A    +T+G+ G     + PLT+A++ G F+  GL 
Sbjct: 3   MLKLAVAAIALACAVPAAAQPAAKAEKPKLTLGVGGKPLLYYLPLTIAERKGFFKDEGLD 62

Query: 74  VDIKKIPQASRHL-ALASGDIQCAATTVETWIAWNANGVKSTQIFQMDKSHGADGIAVRS 132
           V I      ++ L AL  G I       E  I   A G     + ++ +  G   +A + 
Sbjct: 63  VAINDFGGGAKSLQALIGGSIDVVTGAYEHTIRMQAKGQDIVSVIELGRFPGIVLVARKD 122

Query: 133 -DVSKVADLKGKTVAASAPGTSPYFFLAWILKENGLTLKDVKVVNLEPGPAAQA-FVAGQ 190
             +  V DLKG  +  +APG+S  FF+ +++ ++GL   D   V +  G +A A    G+
Sbjct: 123 RPIKSVKDLKGAKIGVTAPGSSTNFFVNFLMAKDGLKPDDASYVGVGGGASAVAQMKRGE 182

Query: 191 NDAAMTYEPYLSTVRAAPDKGKILATTLDYPAVMDTFG---------CTPDFLKANPQAA 241
            DA    +P ++ +    D   ILA +         FG            DF++ NP   
Sbjct: 183 IDAMSNLDPVITKLEDDGDV-IILADSRTEAGNEKIFGGENPAAVLYMKRDFVEQNPVTT 241

Query: 242 KALADSYFQALELIK-ADPE 260
           + L ++++++L+ +K A PE
Sbjct: 242 QKLVNAFYKSLQWLKIATPE 261