Pairwise Alignments

Query, 333 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 12/249 (4%)

Query: 27  IAAIATLVSSASAYAETAVTIGMSGWTGFAPLTLAKQAGIFEKN----GLKVDIKKIPQA 82
           +A +A+ +  + A AE  + IG    +    LTL K  G  E+     G++V   + P  
Sbjct: 11  LALLASALLPSLASAEQTLRIGYQKSSTL--LTLLKARGTLEQRLQAEGIRVTWHEFPSG 68

Query: 83  SRHL-ALASGDIQCAATTVETW-IAWNANGVKSTQIFQMDKSHGADGIAVRSD--VSKVA 138
              L AL  G++  +A   +T  +   A G K T   +   S  A  I V +D  +  +A
Sbjct: 69  LPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQAILVPADSPLKTLA 128

Query: 139 DLKGKTVAASAPGTSPYFFLAWILKENGLTLKDVKVVNLEPGPAAQAFVAGQNDAAMTYE 198
           DLKGK VA +    S Y  +  + K  GLT KD+    L P     AF   + DA +T++
Sbjct: 129 DLKGKRVAVTKAAGSHYLLIQALAKA-GLTFKDITPAYLIPADGRAAFENHKVDAWVTWD 187

Query: 199 PYLSTVRAAPDKGKILATTLDYPAVMDTFGCTPDFLKANPQAAKALADSYFQALELIKAD 258
           PY+++ +      +IL    +  +    +    D+ KA+P+  + +  +  +A    KA+
Sbjct: 188 PYVASAQ-RQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYLALREAGAWTKAN 246

Query: 259 PEKSYATMG 267
           PE +   +G
Sbjct: 247 PEAAARILG 255