Pairwise Alignments

Query, 667 a.a., cytochrome O ubiquinol oxidase subunit I from Agrobacterium fabrum C58

Subject, 541 a.a., Cytochrome c oxidase subunit 1 from Xanthobacter sp. DMC5

 Score =  456 bits (1174), Expect = e-132
 Identities = 222/522 (42%), Positives = 321/522 (61%), Gaps = 14/522 (2%)

Query: 55  WNEWFTSIDHKKIGIMYIILALVMLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFT 114
           W  W  S +HK IG+MY+I A+V  + G A +I +R++  +   G + +  P  ++   T
Sbjct: 25  WKRWVFSTNHKDIGVMYLIFAIVAGIVGGALSIAIRME--LQEPGLQIFKDPQTFNVFTT 82

Query: 115 AHGVIMIFFMAMP-MITGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIITMISLFVG 173
            HG+IMIFFM MP +I G  N+  PL IGA D +FP +NN +FW+     I+ + SLFV 
Sbjct: 83  GHGLIMIFFMVMPALIGGYGNYFAPLMIGAPDTAFPRINNIAFWLLPPAFILALSSLFVE 142

Query: 174 EYAQT-----GWLAYPPLSGIDGSPGVGVDYYIWGLQIAGVGTTLSGINLIVTIIKMRAP 228
               T     GW  YPPLS   G PG  +D  I+ L IAG  + L  INLI TI  MRAP
Sbjct: 143 GAPGTNGFGGGWTIYPPLSSKLGHPGPAMDLLIFSLHIAGASSLLGAINLITTIFNMRAP 202

Query: 229 GMTMMRMPIFVWTSLCSNILIVASFPILTATLALLTLDRYAGTNFFTNDLGGNPMMYVNL 288
           GMT+ +MP+F W+ L +  L++ S P+L   + +L  DR  GT FF    GG+P+++ +L
Sbjct: 203 GMTLHKMPLFAWSQLITGFLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHL 262

Query: 289 IWIWGHPEVYILVLPAFGIFSEIVATFSGKRLFGYASMVYATAVITILSYLVWLHHFFTM 348
            W +GHPEVYIL+LP FG+ S I++TFS K +FGY  M YA   I ++ ++VW HH +T+
Sbjct: 263 FWFFGHPEVYILILPGFGLISHIISTFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMYTV 322

Query: 349 GSGANVNAFFGITTMIISIPTGAKIFNWLFTMYKGRIKFDVPMLWTIGFMITFVIGGMTG 408
           G  +   ++F   TMII++PTG KIF+W+ TM+ G I+F  PMLW IGF+  F +GG+TG
Sbjct: 323 GLSSGTQSYFVAATMIIAVPTGVKIFSWIATMWGGSIQFRTPMLWAIGFIFLFTVGGVTG 382

Query: 409 VLLAVPPADFVLHNSLFLIAHFHNTIIGGVVFGVLAGIVYWFPKAFGYRLDPFWGKLSFW 468
           V+L+    D  LH++ +++AHFH  +  G VF + AG  YWFPK FGY +  FWGKL FW
Sbjct: 383 VVLSNAGIDRSLHDTYYVVAHFHYVLSLGAVFAIFAGWYYWFPKMFGYMIPEFWGKLHFW 442

Query: 469 FWFIGFYFAFMPLYILGLMGITRRISQFEDNSLQIWFVIAAFGAFLIALGIASFIIQLIV 528
             FIG    F P + LGL G+ RR + + D +   W  +++ G+++  + +  F+    +
Sbjct: 443 VTFIGVNLVFFPQHFLGLAGMPRRYADYPD-AFAHWNFVSSIGSYISGIAVLIFLTGTTL 501

Query: 529 SFLKRDQLRDVTGDPY--NARTLEWSTSSPPPQYNFAFTPVI 568
           +FL++++  D   +P+   A TLEW+ SSPPP + F   P I
Sbjct: 502 AFLRKEKAAD---NPWGEGATTLEWTLSSPPPYHQFEVLPRI 540