Pairwise Alignments

Query, 323 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

Subject, 300 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 3e-32
 Identities = 89/294 (30%), Positives = 147/294 (50%), Gaps = 21/294 (7%)

Query: 5   DMLVSILGSTVRLTIPLLFTALAGLFSERAGVFDIGLEGKMLAAAFASACVAYLTANPWA 64
           D LVSIL S      PL++  LAG+ ++RAG++++GLEG M+  + A       T +   
Sbjct: 3   DTLVSILISGT----PLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQ 58

Query: 65  GLLAGIGVSILFSLIHGFAVITNRGNQIVSGVALNFIAAGLTVVLGQAWFGQGGRTPQLP 124
            +L  +G+ +  S +  + V   + N I++G+ L  +  G T +  QA +          
Sbjct: 59  AMLIAVGLCVAASALLWWVVERLKANPIIAGLGLTGLGLGGTSLAIQALYDSEATVT--- 115

Query: 125 GEGRFAPIILPGADAMREVPFIGPLYANVISGNNILTYLAFLAVPLSWWVLYRTRFGLRL 184
                AP  +P  +++     +GP       G ++   L  +AV L W +L RTR GL++
Sbjct: 116 -----APFGIPKLNSLFGAD-LGPF-----GGLSVFVLLMPVAVWLVWLLLERTRLGLQM 164

Query: 185 RAVGENPGAVDTAGISVTWMRYRAVIVAGFLCGFSGAYLAVAQSAAFIANMSAGKGYIAL 244
            A GE+P A  + G++ + MR  A+ + G LC   GA LA      F  NM+AG+G++A 
Sbjct: 165 SASGEHPFAARSVGVNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAF 224

Query: 245 AALIFAKWKPVPVMFACLLFGFLDAFANFMQGKSVPGIGEVPVQIFQAMPYILT 298
           AA+IF     +    A L F  + A    ++ + V G G +   + Q++PY+ T
Sbjct: 225 AAVIFGAGGALGATAAALFFAVVSALG--IRAQLVYG-GAISNDLLQSLPYLAT 275